Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.69□□□□□ -1.66
NBPF3Q9H094 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.69□□□□□ -1.66
NBPF3Q9H094 AC020914.4-201ENST00000597690 277 ntBASIC4.69□□□□□ -1.66
NBPF3Q9H094 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NBPF3Q9H094 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.69□□□□□ -1.66
NBPF3Q9H094 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NBPF3Q9H094 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.69□□□□□ -1.66
NBPF3Q9H094 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NBPF3Q9H094 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NBPF3Q9H094 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
NBPF3Q9H094 SNORA1.3-201ENST00000384676 136 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 MIR759-201ENST00000390224 91 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 RPL21P3-201ENST00000395517 478 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 SNORA3C-201ENST00000408792 125 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 AL159169.1-201ENST00000421119 127 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.68□□□□□ -1.66
NBPF3Q9H094 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.68□□□□□ -1.66
NBPF3Q9H094 RPL39P25-201ENST00000449384 154 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 AC008155.2-201ENST00000464337 397 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 RNU6-162P-201ENST00000516228 103 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 SCARNA14-201ENST00000516903 136 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 AC107934.2-201ENST00000518653 310 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.68□□□□□ -1.66
NBPF3Q9H094 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.68□□□□□ -1.66
NBPF3Q9H094 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NBPF3Q9H094 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
NBPF3Q9H094 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NBPF3Q9H094 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NBPF3Q9H094 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
NBPF3Q9H094 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NBPF3Q9H094 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NBPF3Q9H094 AC058791.1-201ENST00000608412 3198 ntBASIC4.67□□□□□ -1.66
NBPF3Q9H094 SNORA7.2-201ENST00000364446 145 ntBASIC4.67□□□□□ -1.66
NBPF3Q9H094 RNU6-117P-201ENST00000365415 107 ntBASIC4.67□□□□□ -1.66
NBPF3Q9H094 AC017083.1-201ENST00000428093 483 ntBASIC4.67□□□□□ -1.66
NBPF3Q9H094 RPS3P1-201ENST00000456781 192 ntBASIC4.67□□□□□ -1.66
NBPF3Q9H094 RNU7-57P-201ENST00000459540 60 ntBASIC4.67□□□□□ -1.66
NBPF3Q9H094 RNU6-928P-201ENST00000516876 104 ntBASIC4.67□□□□□ -1.66
NBPF3Q9H094 RN7SKP209-201ENST00000516888 304 ntBASIC4.67□□□□□ -1.66
NBPF3Q9H094 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NBPF3Q9H094 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.67□□□□□ -1.66
NBPF3Q9H094 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NBPF3Q9H094 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NBPF3Q9H094 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
NBPF3Q9H094 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
NBPF3Q9H094 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NBPF3Q9H094 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NBPF3Q9H094 RNU4-36P-201ENST00000364294 144 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 SNORA4.2-201ENST00000365313 147 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 Y_RNA.437-201ENST00000384113 113 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 SNORD61-201ENST00000384252 73 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 MIR548D2-201ENST00000384955 97 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.66□□□□□ -1.66
NBPF3Q9H094 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.66□□□□□ -1.66
NBPF3Q9H094 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 RNU6-1073P-201ENST00000517182 106 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.66□□□□□ -1.66
NBPF3Q9H094 AC019288.1-201ENST00000557918 224 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 MIR3199-2-201ENST00000636243 86 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 AL162726.3-218ENST00000636401 95 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NBPF3Q9H094 Z82217.1-201ENST00000625157 8149 ntBASIC4.66□□□□□ -1.66
NBPF3Q9H094 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.66□□□□□ -1.66
NBPF3Q9H094 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
NBPF3Q9H094 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NBPF3Q9H094 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
NBPF3Q9H094 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
NBPF3Q9H094 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
NBPF3Q9H094 AC000403.1-201ENST00000613696 3585 ntBASIC4.65□□□□□ -1.66
NBPF3Q9H094 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
NBPF3Q9H094 snoU2_19.1-201ENST00000362361 80 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 RNA5SP72-201ENST00000364442 117 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 SNORD6-201ENST00000365444 73 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 RNU6-979P-201ENST00000383896 107 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 NDUFB4P4-201ENST00000404822 243 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 RN7SKP156-201ENST00000410308 342 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 RPS4XP11-201ENST00000446897 772 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.65□□□□□ -1.67
NBPF3Q9H094 RPS26P15-201ENST00000488067 348 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 AC023141.12-201ENST00000512399 199 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 RNU1-95P-201ENST00000516357 160 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 RNU1-128P-201ENST00000516704 160 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 MIR5588-201ENST00000581890 63 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 U7.3-201ENST00000616123 62 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 U6.73-201ENST00000619194 103 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.65□□□□□ -1.67
NBPF3Q9H094 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
NBPF3Q9H094 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.65□□□□□ -1.67
NBPF3Q9H094 AC004944.1-201ENST00000517807 3059 ntBASIC4.65□□□□□ -1.67
NBPF3Q9H094 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NBPF3Q9H094 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NBPF3Q9H094 RNU6-1010P-201ENST00000362757 107 ntBASIC4.64□□□□□ -1.67
NBPF3Q9H094 RNU6-24P-201ENST00000384440 107 ntBASIC4.64□□□□□ -1.67
NBPF3Q9H094 AL031121.1-201ENST00000406553 254 ntBASIC4.64□□□□□ -1.67
NBPF3Q9H094 RN7SL271P-201ENST00000487601 295 ntBASIC4.64□□□□□ -1.67
NBPF3Q9H094 AC097462.1-201ENST00000514125 324 ntBASIC4.64□□□□□ -1.67
NBPF3Q9H094 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms