Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RMST_8.1-201ENST00000610287 165 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 AC091152.2-201ENST00000591628 2569 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 Y_RNA.294-201ENST00000364916 102 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 SNORA70.4-201ENST00000365509 134 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 MIR586-201ENST00000385035 97 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 AL512604.1-201ENST00000404812 257 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 RN7SKP111-201ENST00000410349 271 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 CYCSP49-201ENST00000420810 319 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 SNRPGP8-201ENST00000454064 226 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 RN7SL601P-201ENST00000471221 293 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 RNU6-772P-201ENST00000516042 105 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 RNU7-116P-201ENST00000516940 62 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 AC133485.4-201ENST00000561835 220 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 AC138907.4-201ENST00000570107 226 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 POLR3GP1-201ENST00000594073 261 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 AC006254.2-201ENST00000603259 279 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 AC007179.3-201ENST00000604976 235 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 AL137843.1-201ENST00000605078 385 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 AL159152.1-201ENST00000635019 2587 ntBASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SSBP3Q9BWW4 MTND5P32-201ENST00000560711 1802 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 MIR208A-201ENST00000362287 71 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 RNA5SP387-201ENST00000364226 106 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 Y_RNA.309-201ENST00000365046 111 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 RNU1-57P-201ENST00000384491 166 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 RNVU1-14-201ENST00000384770 164 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 Y_RNA.587-201ENST00000391210 103 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 RNA5SP496-201ENST00000391240 109 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 MIR873-201ENST00000401120 77 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 MIR1185-2-201ENST00000408687 86 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 RPL23AP67-201ENST00000465341 474 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 PHBP14-201ENST00000512887 367 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 RNU6-1337P-201ENST00000516525 95 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 AP003357.1-201ENST00000604497 148 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 HSPE1P7-201ENST00000604681 321 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 MIR6076-201ENST00000617521 113 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 SNORA50A-202ENST00000629536 136 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 MIR4679-1-201ENST00000637619 75 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 AC068647.1-201ENST00000489539 2265 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 AC010889.1-201ENST00000566193 2666 ntBASIC2.85□□□□□ -1.95
SSBP3Q9BWW4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 snoU2_19.1-201ENST00000362361 80 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 RNU6-147P-201ENST00000383983 107 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 RNU6-1323P-201ENST00000384025 107 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 RNU2-49P-201ENST00000410666 184 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 AL357552.1-201ENST00000445254 415 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 RPL23AP7-203ENST00000449021 469 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 CENPBD1P1-201ENST00000464061 469 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 RPL23AP54-201ENST00000495129 419 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 RNU6-197P-201ENST00000516680 100 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 IGKV2-26-201ENST00000518305 343 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 AC026333.2-201ENST00000542164 106 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 AC108081.1-201ENST00000604358 221 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 AC005972.2-201ENST00000604690 348 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 AC096577.2-201ENST00000611455 153 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.84□□□□□ -1.95
SSBP3Q9BWW4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SSBP3Q9BWW4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
SSBP3Q9BWW4 AF117829.1-206ENST00000621883 3802 ntBASIC2.84□□□□□ -1.96
SSBP3Q9BWW4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SSBP3Q9BWW4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 Y_RNA.120-201ENST00000363304 110 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 Y_RNA.124-201ENST00000363339 93 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 RNU6-271P-201ENST00000363858 105 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 Y_RNA.333-201ENST00000365274 102 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 SNORD18B-201ENST00000365659 72 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 SNORA11.1-201ENST00000408133 129 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 RNU2-55P-201ENST00000411146 174 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 AL121890.1-201ENST00000435457 205 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 AL158147.1-201ENST00000443970 75 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 RNU6-437P-201ENST00000459408 95 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 AC112771.1-201ENST00000463581 102 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 AC008155.2-201ENST00000464337 397 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 RPL30P14-201ENST00000482744 348 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 RPL36AP21-201ENST00000490372 323 ntBASIC2.83□□□□□ -1.96
SSBP3Q9BWW4 AC093663.1-201ENST00000497190 394 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms