Protein–RNA interactions for Protein: Q9BW71

HIRIP3, HIRA-interacting protein 3, humanhuman

Predicted RBP Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIRIP3Q9BW71 RNU6-635P-201ENST00000516651 102 ntBASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 AC021269.2-201ENST00000532318 330 ntBASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 AC022616.8-201ENST00000533569 253 ntBASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 RRN3P3-201ENST00000549207 578 ntBASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 MIR3668-201ENST00000582138 75 ntBASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 MIR5092-201ENST00000583139 88 ntBASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 SNORD11B-201ENST00000607707 90 ntBASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 Z82209.1-201ENST00000422141 2135 ntBASIC3.4□□□□□ -1.87
HIRIP3Q9BW71 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 RNU6-238P-201ENST00000363313 106 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 Y_RNA.401-201ENST00000383965 117 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 AC007395.1-201ENST00000451333 677 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 AC067942.3-201ENST00000512025 362 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 SNORA40.9-201ENST00000515895 93 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 RNU6-897P-201ENST00000517135 105 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 CYCSP23-201ENST00000519781 313 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 MIR4658-201ENST00000584344 65 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 AC103810.6-201ENST00000606708 136 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 AL137847.3-201ENST00000611521 109 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 U4.1-201ENST00000620349 87 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 AP006437.1-201ENST00000641440 3685 ntBASIC3.39□□□□□ -1.87
HIRIP3Q9BW71 MTND5P6-201ENST00000422338 1798 ntBASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 RNU6-482P-201ENST00000391068 107 ntBASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 AC007064.1-201ENST00000412238 351 ntBASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 RNU6-408P-201ENST00000515910 100 ntBASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 RNU6-991P-201ENST00000516168 107 ntBASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 RNY3P15-201ENST00000516297 97 ntBASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 RNU6-107P-201ENST00000516643 102 ntBASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 Y_RNA.713-201ENST00000517013 96 ntBASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 AL357075.2-201ENST00000614906 189 ntBASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.38□□□□□ -1.87
HIRIP3Q9BW71 Y_RNA.415-201ENST00000384012 112 ntBASIC3.37□□□□□ -1.87
HIRIP3Q9BW71 AL135786.1-201ENST00000415892 214 ntBASIC3.37□□□□□ -1.87
HIRIP3Q9BW71 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.37□□□□□ -1.87
HIRIP3Q9BW71 AC073910.1-201ENST00000445047 438 ntBASIC3.37□□□□□ -1.87
HIRIP3Q9BW71 Y_RNA.668-201ENST00000516233 93 ntBASIC3.37□□□□□ -1.87
HIRIP3Q9BW71 AC004486.1-201ENST00000546846 233 ntBASIC3.37□□□□□ -1.87
HIRIP3Q9BW71 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.37□□□□□ -1.87
HIRIP3Q9BW71 AC011373.1-201ENST00000607270 237 ntBASIC3.37□□□□□ -1.87
HIRIP3Q9BW71 MIR1248-201ENST00000629190 106 ntBASIC3.37□□□□□ -1.87
HIRIP3Q9BW71 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.37□□□□□ -1.87
HIRIP3Q9BW71 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 Y_RNA.176-201ENST00000363815 109 ntBASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 RNA5SP99-201ENST00000364020 114 ntBASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 RNU6-1305P-201ENST00000364353 104 ntBASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 SNORD87-201ENST00000364849 89 ntBASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 DEFA7P-201ENST00000382676 285 ntBASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 Y_RNA.498-201ENST00000384460 102 ntBASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 Y_RNA.574-201ENST00000384766 95 ntBASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 AL079342.1-201ENST00000401460 267 ntBASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 RNU6-130P-201ENST00000411112 103 ntBASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIRIP3Q9BW71 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 RNU6-545P-201ENST00000362681 104 ntBASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 Y_RNA.143-201ENST00000363520 106 ntBASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 MRPL35P1-201ENST00000404272 572 ntBASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 RNA5SP181-201ENST00000410246 98 ntBASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 RNU6-625P-201ENST00000459412 107 ntBASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 Y_RNA.680-201ENST00000516441 93 ntBASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 RNU6-548P-201ENST00000517083 115 ntBASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 MIR5194-201ENST00000582634 120 ntBASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 AC068205.3-201ENST00000636385 468 ntBASIC3.35□□□□□ -1.87
HIRIP3Q9BW71 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 Y_RNA.149-201ENST00000363558 117 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 RNU6-379P-201ENST00000363813 104 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 Y_RNA.183-201ENST00000363882 113 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 RNU6-702P-201ENST00000364982 107 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 RNU6-438P-201ENST00000365561 103 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 RNU6-611P-201ENST00000384276 104 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 AC009310.1-201ENST00000414414 451 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 ELOCP20-201ENST00000422460 345 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 RPS15AP28-201ENST00000435088 386 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 AC074133.1-201ENST00000515696 183 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 AC018448.1-201ENST00000552843 316 ntBASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.34□□□□□ -1.87
HIRIP3Q9BW71 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HIRIP3Q9BW71 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms