Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 AC091953.5-201ENST00000622919 233 ntBASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 AL136164.4-201ENST00000625013 2135 ntBASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU1-105P-201ENST00000363470 161 ntBASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 Y_RNA.172-201ENST00000363765 102 ntBASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR539-201ENST00000365690 78 ntBASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR873-201ENST00000401120 77 ntBASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU6-1098P-201ENST00000516772 96 ntBASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU6-971P-201ENST00000516920 106 ntBASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 AC112693.2-201ENST00000556538 232 ntBASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR3186-201ENST00000577404 85 ntBASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ZKSCAN3Q9BRR0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 AP003122.5-201ENST00000527668 3766 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 Y_RNA.127-201ENST00000363386 109 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 SNORA7.4-201ENST00000384249 137 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 SNORD37.2-201ENST00000391075 66 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR300-201ENST00000401138 83 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 Z98742.2-201ENST00000431564 187 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 RPL23AP58-201ENST00000440453 469 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 RPL23AP7-203ENST00000449021 469 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 HSPE1P13-201ENST00000451143 297 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 RN7SL442P-201ENST00000473804 320 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 AC008885.1-201ENST00000514930 301 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 RPL30P11-203ENST00000598995 310 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR548AY-201ENST00000617669 107 ntBASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.67□□□□□ -1.82
ZKSCAN3Q9BRR0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 Y_RNA.273-201ENST00000364703 102 ntBASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU6-728P-201ENST00000365375 104 ntBASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR128-1-201ENST00000384921 82 ntBASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 SNORA48.2-201ENST00000390926 124 ntBASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 AL606845.1-201ENST00000404881 255 ntBASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 AL031183.1-201ENST00000457667 207 ntBASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 SNORA64.4-201ENST00000516632 81 ntBASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 LARP7P3-201ENST00000579888 337 ntBASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.66□□□□□ -1.82
ZKSCAN3Q9BRR0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ZKSCAN3Q9BRR0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
ZKSCAN3Q9BRR0 SNORD56.3-201ENST00000363507 71 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-271P-201ENST00000363858 105 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-407P-201ENST00000365280 104 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORD116-14-201ENST00000383894 92 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORD116-17-201ENST00000383929 92 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 Y_RNA.420-201ENST00000384043 110 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORA54-201ENST00000384281 123 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORD116-15-201ENST00000384445 92 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORD116-19-201ENST00000384729 92 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 MT-TT-201ENST00000387460 66 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 AL139095.1-201ENST00000404326 391 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 MIR1283-1-201ENST00000408494 87 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 RPL23AP83-201ENST00000434984 473 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 AC114982.1-201ENST00000469402 321 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 RNA5SP112-201ENST00000515937 99 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU6-1333P-201ENST00000516162 93 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORA74D-201ENST00000516404 141 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 RNU7-115P-201ENST00000516433 55 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 MIR3646-201ENST00000578301 84 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 AC103810.1-201ENST00000579873 453 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 AL359881.1-201ENST00000602916 267 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 AC068647.2-201ENST00000637380 353 ntBASIC3.65□□□□□ -1.83
ZKSCAN3Q9BRR0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 RNA5SP295-201ENST00000362655 121 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 Y_RNA.71-201ENST00000362892 104 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 Y_RNA.124-201ENST00000363339 93 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 Y_RNA.218-201ENST00000364218 104 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 Y_RNA.261-201ENST00000364631 102 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 U8.7-201ENST00000364940 136 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORA20-201ENST00000384662 132 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 SNORD15B-201ENST00000384714 146 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 MIR518C-201ENST00000384822 101 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 AC006539.3-201ENST00000454258 129 ntBASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.64□□□□□ -1.83
ZKSCAN3Q9BRR0 RNA5SP341-201ENST00000516261 117 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 281.7 ms