Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MIR548D2-201ENST00000384955 97 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 U8.17-201ENST00000391292 132 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 AC017083.1-201ENST00000428093 483 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 RN7SL860P-201ENST00000473738 223 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 SNORA70.14-201ENST00000516205 110 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 SCARNA17.1-201ENST00000516211 143 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 SCARNA17.2-201ENST00000516334 143 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.94□□□□□ -1.78
USB1Q9BQ65 PARP1P2-201ENST00000556806 195 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 AC074050.1-201ENST00000563247 211 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 MIR378J-201ENST00000611988 109 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 SCARNA17.4-201ENST00000614296 143 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 uc_338.13-201ENST00000618243 179 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.94□□□□□ -1.78
USB1Q9BQ65 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
USB1Q9BQ65 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USB1Q9BQ65 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USB1Q9BQ65 ZNF720P1-201ENST00000562403 1939 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USB1Q9BQ65 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USB1Q9BQ65 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USB1Q9BQ65 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USB1Q9BQ65 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.93□□□□□ -1.78
USB1Q9BQ65 Y_RNA.107-201ENST00000363190 121 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 RNA5SP509-201ENST00000364577 119 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 RNU6-1189P-201ENST00000383958 107 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 Z98941.1-201ENST00000407764 100 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 SNORA11F-201ENST00000408237 128 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 AC060773.1-201ENST00000421698 310 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 Z74021.1-201ENST00000423610 407 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 RPS29P17-201ENST00000430795 166 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 RN7SL98P-201ENST00000462271 300 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 SNRPGP3-201ENST00000469405 227 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.93□□□□□ -1.78
USB1Q9BQ65 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.93□□□□□ -1.78
USB1Q9BQ65 RNU7-70P-201ENST00000516941 66 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.93□□□□□ -1.78
USB1Q9BQ65 AC015912.2-201ENST00000571053 181 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 MIR4697-201ENST00000582977 78 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 AC007229.1-201ENST00000590455 412 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 AC080128.1-201ENST00000474389 1917 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
USB1Q9BQ65 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USB1Q9BQ65 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
USB1Q9BQ65 OTUD4P1-201ENST00000237841 3067 ntBASIC3.93□□□□□ -1.78
USB1Q9BQ65 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
USB1Q9BQ65 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
USB1Q9BQ65 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.92□□□□□ -1.78
USB1Q9BQ65 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.92□□□□□ -1.78
USB1Q9BQ65 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
USB1Q9BQ65 RNU6-743P-201ENST00000364151 106 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 Y_RNA.267-201ENST00000364679 109 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 RNU6-546P-201ENST00000383991 107 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 MIR802-201ENST00000390235 94 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 AC123900.1-201ENST00000420390 96 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 AC009414.1-201ENST00000427200 443 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 AC244505.4-201ENST00000434905 287 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 SSXP5-201ENST00000443473 287 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 RNU7-164P-201ENST00000459221 62 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 PHBP14-201ENST00000512887 367 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 AC079587.1-201ENST00000603846 277 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 AL359075.3-201ENST00000613288 217 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 MIR6716-201ENST00000613413 80 ntBASIC3.92□□□□□ -1.78
USB1Q9BQ65 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.92□□□□□ -1.78
USB1Q9BQ65 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USB1Q9BQ65 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.92□□□□□ -1.78
USB1Q9BQ65 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USB1Q9BQ65 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USB1Q9BQ65 SNORD6-201ENST00000365444 73 ntBASIC3.91□□□□□ -1.78
USB1Q9BQ65 MIR548O-201ENST00000408583 114 ntBASIC3.91□□□□□ -1.78
USB1Q9BQ65 PHBP16-201ENST00000446318 950 ntBASIC3.91□□□□□ -1.78
USB1Q9BQ65 RPL39P25-201ENST00000449384 154 ntBASIC3.91□□□□□ -1.78
USB1Q9BQ65 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 RNU7-170P-201ENST00000459303 61 ntBASIC3.91□□□□□ -1.78
USB1Q9BQ65 AC093259.1-201ENST00000509755 300 ntBASIC3.91□□□□□ -1.78
USB1Q9BQ65 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 AL360157.1-201ENST00000565962 87 ntBASIC3.91□□□□□ -1.78
USB1Q9BQ65 MIR3163-201ENST00000581592 73 ntBASIC3.91□□□□□ -1.78
USB1Q9BQ65 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 AC091905.2-201ENST00000623143 306 ntBASIC3.91□□□□□ -1.78
USB1Q9BQ65 MIR6079-201ENST00000635807 62 ntBASIC3.91□□□□□ -1.78
USB1Q9BQ65 AL162726.3-218ENST00000636401 95 ntBASIC3.91□□□□□ -1.78
USB1Q9BQ65 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
USB1Q9BQ65 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USB1Q9BQ65 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USB1Q9BQ65 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
USB1Q9BQ65 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
USB1Q9BQ65 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
USB1Q9BQ65 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.9□□□□□ -1.78
USB1Q9BQ65 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
USB1Q9BQ65 RNY1P10-201ENST00000363268 113 ntBASIC3.9□□□□□ -1.79
USB1Q9BQ65 RNU6-1104P-201ENST00000384723 104 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms