Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RNU4-30P-201ENST00000410245 143 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 Y_RNA.597-201ENST00000410463 100 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 Y_RNA.602-201ENST00000410535 92 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 AC007064.1-201ENST00000412238 351 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.85□□□□□ -2.11
VGLL1Q99990 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.85□□□□□ -2.11
VGLL1Q99990 RAB28P5-201ENST00000427490 651 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.85□□□□□ -2.11
VGLL1Q99990 AC080013.2-201ENST00000460866 323 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 RNU6-1338P-201ENST00000516328 91 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 RNU2-44P-201ENST00000516795 194 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 CYCSP23-201ENST00000519781 313 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 AC018630.3-201ENST00000542637 96 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 AC105245.1-201ENST00000581934 244 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 MIR3199-1-201ENST00000582434 88 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 AC006386.2-201ENST00000624491 75 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 AC012005.1-201ENST00000624575 75 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 MIR7157-201ENST00000635801 60 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
VGLL1Q99990 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.85□□□□□ -2.11
VGLL1Q99990 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VGLL1Q99990 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
VGLL1Q99990 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.85□□□□□ -2.11
VGLL1Q99990 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
VGLL1Q99990 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.84□□□□□ -2.11
VGLL1Q99990 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
VGLL1Q99990 MIR21-201ENST00000362134 72 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 RNU6-454P-201ENST00000364292 107 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 SNORD87-201ENST00000364849 89 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 Y_RNA.476-201ENST00000384347 108 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 Y_RNA.539-201ENST00000384635 107 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 SNORD58.1-201ENST00000391313 66 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 RNU5A-5P-201ENST00000411054 116 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 AC096920.1-201ENST00000423991 241 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 AC063976.3-201ENST00000426849 329 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.84□□□□□ -2.11
VGLL1Q99990 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.84□□□□□ -2.11
VGLL1Q99990 UQCRBP2-201ENST00000447827 297 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 SNORD109B-201ENST00000458961 67 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 SNORD109A-201ENST00000459128 67 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 RNU6-625P-201ENST00000459412 107 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 RPL39P38-201ENST00000467018 153 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.84□□□□□ -2.11
VGLL1Q99990 HMGB3P17-201ENST00000504195 649 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.84□□□□□ -2.11
VGLL1Q99990 RNU6-1023P-201ENST00000516137 106 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 RNU6-1098P-201ENST00000516772 96 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 HSPE1P18-201ENST00000517602 280 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 DEFB108E-201ENST00000524692 240 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.84□□□□□ -2.11
VGLL1Q99990 GTF3AP2-201ENST00000557014 266 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 AC090616.3-201ENST00000582184 217 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 MIR5006-201ENST00000583027 110 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 AC022441.3-201ENST00000605737 136 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 AC008873.1-201ENST00000625051 138 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 AC068205.3-201ENST00000636385 468 ntBASIC1.84□□□□□ -2.11
VGLL1Q99990 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.84□□□□□ -2.11
VGLL1Q99990 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
VGLL1Q99990 MTND5P6-201ENST00000422338 1798 ntBASIC1.84□□□□□ -2.12
VGLL1Q99990 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.83□□□□□ -2.12
VGLL1Q99990 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VGLL1Q99990 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.83□□□□□ -2.12
VGLL1Q99990 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
VGLL1Q99990 RNU6-461P-201ENST00000364195 107 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 RNU6-1175P-201ENST00000365200 107 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 RNU6-290P-201ENST00000365212 101 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 RNU6-301P-201ENST00000384277 107 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 Y_RNA.477-201ENST00000384352 108 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 MIR196B-201ENST00000384852 84 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 RNU6-220P-201ENST00000390919 107 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 AL033519.2-201ENST00000403958 392 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 RNU2-52P-201ENST00000410680 190 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 RNU2-48P-201ENST00000410694 191 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 AL513328.1-201ENST00000446460 224 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 RPL23AP3-201ENST00000453844 468 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 MTND4LP30-201ENST00000454092 297 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.83□□□□□ -2.12
VGLL1Q99990 ATP5EP1-201ENST00000510257 156 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.83□□□□□ -2.12
VGLL1Q99990 MIR449C-201ENST00000516047 92 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 Y_RNA.673-201ENST00000516306 88 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 RNU6-388P-201ENST00000517012 105 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 RNU6-389P-201ENST00000517048 105 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 AC005176.2-201ENST00000596933 147 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 SNORD113-5-201ENST00000607261 78 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 SNORD11B-201ENST00000607707 90 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 AC090425.1-201ENST00000610007 140 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 MIR6840-201ENST00000611937 71 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 AL590240.4-201ENST00000616908 390 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.83□□□□□ -2.12
VGLL1Q99990 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.83□□□□□ -2.12
VGLL1Q99990 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
VGLL1Q99990 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
VGLL1Q99990 AL391987.6-201ENST00000305671 199 ntBASIC1.82□□□□□ -2.12
VGLL1Q99990 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VGLL1Q99990 Y_RNA.20-201ENST00000362479 113 ntBASIC1.82□□□□□ -2.12
VGLL1Q99990 RNU4-90P-201ENST00000362773 141 ntBASIC1.82□□□□□ -2.12
VGLL1Q99990 SNORA5B-201ENST00000363786 132 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 309.8 ms