Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNU6-1026P-201ENST00000384465 108 ntBASIC2.7□□□□□ -1.98
SMOQ99835 Y_RNA.539-201ENST00000384635 107 ntBASIC2.7□□□□□ -1.98
SMOQ99835 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SMOQ99835 MIR548H3-201ENST00000408771 118 ntBASIC2.7□□□□□ -1.98
SMOQ99835 RNU6-847P-201ENST00000411115 108 ntBASIC2.7□□□□□ -1.98
SMOQ99835 RNU6-1199P-201ENST00000411249 104 ntBASIC2.7□□□□□ -1.98
SMOQ99835 AL390729.2-201ENST00000416137 156 ntBASIC2.7□□□□□ -1.98
SMOQ99835 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.7□□□□□ -1.98
SMOQ99835 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.7□□□□□ -1.98
SMOQ99835 RNA5SP320-201ENST00000516263 124 ntBASIC2.7□□□□□ -1.98
SMOQ99835 RNU6-111P-201ENST00000517179 105 ntBASIC2.7□□□□□ -1.98
SMOQ99835 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.7□□□□□ -1.98
SMOQ99835 AC008749.1-201ENST00000597650 306 ntBASIC2.7□□□□□ -1.98
SMOQ99835 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SMOQ99835 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SMOQ99835 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
SMOQ99835 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.69□□□□□ -1.98
SMOQ99835 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.69□□□□□ -1.98
SMOQ99835 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMOQ99835 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.69□□□□□ -1.98
SMOQ99835 MIR449A-201ENST00000362113 91 ntBASIC2.69□□□□□ -1.98
SMOQ99835 MIR410-201ENST00000362222 80 ntBASIC2.69□□□□□ -1.98
SMOQ99835 RNU6-454P-201ENST00000364292 107 ntBASIC2.69□□□□□ -1.98
SMOQ99835 Y_RNA.352-201ENST00000365439 102 ntBASIC2.69□□□□□ -1.98
SMOQ99835 RNU6-1264P-201ENST00000383891 107 ntBASIC2.69□□□□□ -1.98
SMOQ99835 Y_RNA.569-201ENST00000384749 103 ntBASIC2.69□□□□□ -1.98
SMOQ99835 MIR1294-201ENST00000408503 142 ntBASIC2.69□□□□□ -1.98
SMOQ99835 AC009963.1-201ENST00000417265 157 ntBASIC2.69□□□□□ -1.98
SMOQ99835 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
SMOQ99835 RNU5F-4P-201ENST00000516581 114 ntBASIC2.69□□□□□ -1.98
SMOQ99835 AL590240.4-201ENST00000616908 390 ntBASIC2.69□□□□□ -1.98
SMOQ99835 AC006001.4-201ENST00000622243 395 ntBASIC2.69□□□□□ -1.98
SMOQ99835 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.69□□□□□ -1.98
SMOQ99835 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMOQ99835 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMOQ99835 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMOQ99835 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.68□□□□□ -1.98
SMOQ99835 Y_RNA.54-201ENST00000362766 105 ntBASIC2.68□□□□□ -1.98
SMOQ99835 RNU6-1266P-201ENST00000362794 105 ntBASIC2.68□□□□□ -1.98
SMOQ99835 SNORD56.5-201ENST00000364281 72 ntBASIC2.68□□□□□ -1.98
SMOQ99835 RNU6-234P-201ENST00000365229 104 ntBASIC2.68□□□□□ -1.98
SMOQ99835 Y_RNA.478-201ENST00000384358 107 ntBASIC2.68□□□□□ -1.98
SMOQ99835 MIR27B-201ENST00000385129 97 ntBASIC2.68□□□□□ -1.98
SMOQ99835 RNU6-220P-201ENST00000390919 107 ntBASIC2.68□□□□□ -1.98
SMOQ99835 FO393413.1-201ENST00000402892 195 ntBASIC2.68□□□□□ -1.98
SMOQ99835 RNA5SP344-201ENST00000411081 104 ntBASIC2.68□□□□□ -1.98
SMOQ99835 RPL23AP36-201ENST00000413895 458 ntBASIC2.68□□□□□ -1.98
SMOQ99835 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.68□□□□□ -1.98
SMOQ99835 MRPS10P1-201ENST00000448483 130 ntBASIC2.68□□□□□ -1.98
SMOQ99835 AC005042.3-201ENST00000453230 174 ntBASIC2.68□□□□□ -1.98
SMOQ99835 AC080013.2-201ENST00000460866 323 ntBASIC2.68□□□□□ -1.98
SMOQ99835 ATP5EP1-201ENST00000510257 156 ntBASIC2.68□□□□□ -1.98
SMOQ99835 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.68□□□□□ -1.98
SMOQ99835 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.68□□□□□ -1.98
SMOQ99835 RNU6-965P-201ENST00000516721 96 ntBASIC2.68□□□□□ -1.98
SMOQ99835 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.68□□□□□ -1.98
SMOQ99835 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.68□□□□□ -1.98
SMOQ99835 RPL17P51-201ENST00000605218 238 ntBASIC2.68□□□□□ -1.98
SMOQ99835 AC013412.1-201ENST00000610687 192 ntBASIC2.68□□□□□ -1.98
SMOQ99835 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.68□□□□□ -1.98
SMOQ99835 AC008873.1-201ENST00000625051 138 ntBASIC2.68□□□□□ -1.98
SMOQ99835 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.68□□□□□ -1.98
SMOQ99835 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMOQ99835 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SMOQ99835 RNU6-545P-201ENST00000362681 104 ntBASIC2.67□□□□□ -1.98
SMOQ99835 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
SMOQ99835 Y_RNA.277-201ENST00000364754 102 ntBASIC2.67□□□□□ -1.98
SMOQ99835 RNU6-326P-201ENST00000365480 107 ntBASIC2.67□□□□□ -1.98
SMOQ99835 Y_RNA.383-201ENST00000383855 97 ntBASIC2.67□□□□□ -1.98
SMOQ99835 RNU1-109P-201ENST00000383960 147 ntBASIC2.67□□□□□ -1.98
SMOQ99835 Y_RNA.418-201ENST00000384029 102 ntBASIC2.67□□□□□ -1.98
SMOQ99835 RNU6-1310P-201ENST00000384153 107 ntBASIC2.67□□□□□ -1.98
SMOQ99835 Y_RNA.552-201ENST00000384665 112 ntBASIC2.67□□□□□ -1.98
SMOQ99835 MIR518C-201ENST00000384822 101 ntBASIC2.67□□□□□ -1.98
SMOQ99835 MIR548B-201ENST00000385247 97 ntBASIC2.67□□□□□ -1.98
SMOQ99835 SNORA53-201ENST00000391141 249 ntBASIC2.67□□□□□ -1.98
SMOQ99835 RNA5SP475-201ENST00000410568 110 ntBASIC2.67□□□□□ -1.98
SMOQ99835 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.67□□□□□ -1.98
SMOQ99835 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.67□□□□□ -1.98
SMOQ99835 UBBP3-201ENST00000445497 241 ntBASIC2.67□□□□□ -1.98
SMOQ99835 RNU7-14P-201ENST00000459331 62 ntBASIC2.67□□□□□ -1.98
SMOQ99835 RNU6-155P-201ENST00000516347 100 ntBASIC2.67□□□□□ -1.98
SMOQ99835 RNU2-31P-201ENST00000516954 155 ntBASIC2.67□□□□□ -1.98
SMOQ99835 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.67□□□□□ -1.98
SMOQ99835 AC018630.3-201ENST00000542637 96 ntBASIC2.67□□□□□ -1.98
SMOQ99835 MIR4643-201ENST00000577473 78 ntBASIC2.67□□□□□ -1.98
SMOQ99835 U2.14-201ENST00000615943 113 ntBASIC2.67□□□□□ -1.98
SMOQ99835 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SMOQ99835 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.67□□□□□ -1.98
SMOQ99835 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
SMOQ99835 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SMOQ99835 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.66□□□□□ -1.98
SMOQ99835 RNU6-1305P-201ENST00000364353 104 ntBASIC2.66□□□□□ -1.98
SMOQ99835 RNU6-338P-201ENST00000383888 105 ntBASIC2.66□□□□□ -1.98
SMOQ99835 MIR95-201ENST00000385072 81 ntBASIC2.66□□□□□ -1.98
SMOQ99835 RNU2-54P-201ENST00000410299 190 ntBASIC2.66□□□□□ -1.98
SMOQ99835 POLR2KP2-201ENST00000438155 177 ntBASIC2.66□□□□□ -1.98
SMOQ99835 AL139109.1-201ENST00000455491 297 ntBASIC2.66□□□□□ -1.98
SMOQ99835 HMGN2P9-201ENST00000476875 229 ntBASIC2.66□□□□□ -1.98
SMOQ99835 RN7SL499P-201ENST00000481141 276 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms