Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RN7SKP61-201ENST00000410642 295 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC004866.1-201ENST00000411748 78 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 COTL1P1-201ENST00000422309 375 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 RPL23AP58-201ENST00000440453 469 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 RPL39P29-201ENST00000447779 157 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC245047.8-201ENST00000456455 284 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC006026.2-201ENST00000457376 180 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU7-197P-201ENST00000458836 62 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 RPS29P12-201ENST00000460178 152 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC090525.1-201ENST00000479116 478 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC103975.1-201ENST00000482506 483 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 RPS27P26-201ENST00000494583 239 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-1007P-201ENST00000516586 107 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU2-12P-201ENST00000517216 168 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC016256.1-201ENST00000547971 354 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 CR383656.8-201ENST00000549046 145 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC009127.3-201ENST00000570531 403 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC011471.1-201ENST00000585766 187 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 DNAJC19P2-201ENST00000593340 302 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 MIR6129-201ENST00000616087 109 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC007318.2-201ENST00000620999 243 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 FAM35BP-202ENST00000497389 3337 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 AC093831.2-201ENST00000624393 3427 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 Y_RNA.172-201ENST00000363765 102 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 SNORD87-201ENST00000364849 89 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 SNORA51.4-201ENST00000364993 124 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 AL133475.1-201ENST00000404414 305 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 AC006461.1-201ENST00000412637 326 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 HMGN2P30-201ENST00000423237 256 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 AL590383.1-201ENST00000428602 75 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 AC104332.2-201ENST00000429959 156 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 RPS27AP10-201ENST00000496103 208 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 RN7SKP43-201ENST00000516173 320 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-107P-201ENST00000516643 102 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-1198P-201ENST00000516904 67 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 MIR4679-1-201ENST00000637619 75 ntBASIC3.06□□□□□ -1.92
CDK5RAP1Q96SZ6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-899P-201ENST00000363947 107 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-1280P-201ENST00000365211 107 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-407P-201ENST00000365280 104 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 MIR634-201ENST00000385208 97 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 U3.26-201ENST00000391236 204 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 RNA5SP344-201ENST00000411081 104 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 AL139132.1-201ENST00000431587 344 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 AL031183.1-201ENST00000457667 207 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 AC092991.1-201ENST00000477176 376 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 SCARNA13-201ENST00000516672 275 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 RNA5SP54-201ENST00000516951 92 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 AC109810.1-201ENST00000534066 224 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 EIF4BP1-201ENST00000554881 351 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 AC021231.3-201ENST00000558497 370 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 AL391813.1-201ENST00000603098 260 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 AC013791.1-201ENST00000616619 62 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.05□□□□□ -1.92
CDK5RAP1Q96SZ6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 Y_RNA.294-201ENST00000364916 102 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 MIR626-201ENST00000385032 94 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 AL031121.1-201ENST00000406553 254 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 RNA5SP475-201ENST00000410568 110 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 NDUFB4P6-201ENST00000436819 366 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 EEF1B2P7-201ENST00000451177 676 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 AC107027.2-201ENST00000512197 115 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-659P-201ENST00000516454 104 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-928P-201ENST00000516876 104 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 AL356157.2-201ENST00000605122 111 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 AC011603.4-201ENST00000611325 277 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 AL137790.1-201ENST00000634283 177 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 AC010329.5-201ENST00000623497 2174 ntBASIC3.04□□□□□ -1.92
CDK5RAP1Q96SZ6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms