Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 MIR5006-201ENST00000583027 110 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 Z83818.1-201ENST00000603584 150 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 RNU6-682P-201ENST00000363843 106 ntBASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 Y_RNA.270-201ENST00000364693 104 ntBASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 RNA5SP475-201ENST00000410568 110 ntBASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 RNA5SP344-201ENST00000411081 104 ntBASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 AC104332.1-201ENST00000440471 797 ntBASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 RPL31P41-201ENST00000477967 372 ntBASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 SNORD59.2-201ENST00000516873 68 ntBASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHAMP1Q96JM3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 RNA5SP354-201ENST00000391247 136 ntBASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 RNU6-436P-201ENST00000516171 114 ntBASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 AP002392.1-201ENST00000537692 208 ntBASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 ELOCP29-201ENST00000588193 334 ntBASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 DEFB117-201ENST00000602356 141 ntBASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 AC005828.6-201ENST00000606610 232 ntBASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 AC007256.1-201ENST00000392253 2765 ntBASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 AC091564.4-201ENST00000533934 2194 ntBASIC3.24□□□□□ -1.89
CHAMP1Q96JM3 RNU1-72P-201ENST00000362976 153 ntBASIC3.23□□□□□ -1.89
CHAMP1Q96JM3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.23□□□□□ -1.89
CHAMP1Q96JM3 MRPS36P2-201ENST00000512569 299 ntBASIC3.23□□□□□ -1.89
CHAMP1Q96JM3 Y_RNA.679-201ENST00000516416 91 ntBASIC3.23□□□□□ -1.89
CHAMP1Q96JM3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.23□□□□□ -1.89
CHAMP1Q96JM3 AC107016.2-201ENST00000547968 190 ntBASIC3.23□□□□□ -1.89
CHAMP1Q96JM3 AC027176.1-201ENST00000560204 514 ntBASIC3.23□□□□□ -1.89
CHAMP1Q96JM3 AL512605.2-201ENST00000592972 256 ntBASIC3.23□□□□□ -1.89
CHAMP1Q96JM3 RPL30P11-203ENST00000598995 310 ntBASIC3.23□□□□□ -1.89
CHAMP1Q96JM3 AC073349.3-201ENST00000617616 186 ntBASIC3.23□□□□□ -1.89
CHAMP1Q96JM3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CHAMP1Q96JM3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 SNORA71.1-201ENST00000364523 117 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 Y_RNA.329-201ENST00000365209 107 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 Y_RNA.464-201ENST00000384282 110 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 RNU6-918P-201ENST00000391219 106 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 SNORD88.1-201ENST00000408684 91 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 RNU6-1328P-201ENST00000410938 106 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 RNA5SP184-201ENST00000411071 108 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 COX6CP10-201ENST00000416832 224 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 RN7SL499P-201ENST00000481141 276 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 HSPE1P18-201ENST00000517602 280 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 AC022559.1-201ENST00000520905 205 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 AC103810.1-201ENST00000579873 453 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 MIR4765-201ENST00000585007 77 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 AC010620.2-201ENST00000600135 313 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 AC008873.1-201ENST00000625051 138 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 snoU18.1-201ENST00000629629 71 ntBASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHAMP1Q96JM3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.21□□□□□ -1.89
CHAMP1Q96JM3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 U3.40-201ENST00000408706 208 ntBASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 Y_RNA.597-201ENST00000410463 100 ntBASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 RNU6-1212P-201ENST00000517023 104 ntBASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 AC079600.2-201ENST00000550076 130 ntBASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 UCA1.1-201ENST00000620952 75 ntBASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.21□□□□□ -1.9
CHAMP1Q96JM3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 RNU6-545P-201ENST00000362681 104 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 SNORD115-30-201ENST00000364117 82 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 Y_RNA.243-201ENST00000364481 109 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 MIR591-201ENST00000385290 95 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 NDUFB4P10-201ENST00000452541 359 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 AC008413.1-201ENST00000511864 177 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 RNY3P16-201ENST00000516338 101 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 RNU6-107P-201ENST00000516643 102 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms