Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 RNU7-14P-201ENST00000459331 62 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 SRIP1-201ENST00000489235 288 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 RPS23P5-201ENST00000495419 428 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.53□□□□□ -2
VPS50Q96JG6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.53□□□□□ -2
VPS50Q96JG6 AC107222.1-201ENST00000510899 637 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 RPL23AP94-201ENST00000512518 302 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 RNU6-966P-201ENST00000516479 104 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.53□□□□□ -2
VPS50Q96JG6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.53□□□□□ -2
VPS50Q96JG6 AC018630.3-201ENST00000542637 96 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.53□□□□□ -2
VPS50Q96JG6 AL355297.2-201ENST00000604792 129 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 AP000942.4-201ENST00000604811 241 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.53□□□□□ -2
VPS50Q96JG6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
VPS50Q96JG6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS50Q96JG6 RNU5F-3P-201ENST00000363767 117 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 RNU6-546P-201ENST00000383991 107 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 Y_RNA.452-201ENST00000384202 108 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 Y_RNA.498-201ENST00000384460 102 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 RNU6-102P-201ENST00000384485 104 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 RNU6-713P-201ENST00000384761 107 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 RNU4-30P-201ENST00000410245 143 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 RNU2-48P-201ENST00000410694 191 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.52□□□□□ -2.01
VPS50Q96JG6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS50Q96JG6 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS50Q96JG6 RNU6-625P-201ENST00000459412 107 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS50Q96JG6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS50Q96JG6 PRELID2P1-201ENST00000552837 301 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS50Q96JG6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS50Q96JG6 SNORD11B-201ENST00000607707 90 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 AC245884.12-201ENST00000615364 59 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 U4.1-201ENST00000620349 87 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 LINC02555-201ENST00000563933 1951 ntBASIC2.52□□□□□ -2.01
VPS50Q96JG6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS50Q96JG6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS50Q96JG6 Y_RNA.461-201ENST00000384263 103 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 MIR1302-3-201ENST00000408128 138 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 Y_RNA.602-201ENST00000410535 92 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS50Q96JG6 RAB28P5-201ENST00000427490 651 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 AC018868.1-201ENST00000491307 315 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 HMGB3P3-201ENST00000510526 400 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 AC074133.1-201ENST00000515696 183 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 RNU6-107P-201ENST00000516643 102 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 Y_RNA.713-201ENST00000517013 96 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS50Q96JG6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS50Q96JG6 MIR4635-201ENST00000583759 79 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS50Q96JG6 IGHVIII-44-202ENST00000636235 289 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 AC068205.3-201ENST00000636385 468 ntBASIC2.51□□□□□ -2.01
VPS50Q96JG6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS50Q96JG6 SNORD113-8-201ENST00000363497 74 ntBASIC2.5□□□□□ -2.01
VPS50Q96JG6 RNU6-1305P-201ENST00000364353 104 ntBASIC2.5□□□□□ -2.01
VPS50Q96JG6 Y_RNA.286-201ENST00000364813 102 ntBASIC2.5□□□□□ -2.01
VPS50Q96JG6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VPS50Q96JG6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS50Q96JG6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS50Q96JG6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS50Q96JG6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS50Q96JG6 CYP2C59P-201ENST00000457790 269 ntBASIC2.5□□□□□ -2.01
VPS50Q96JG6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.5□□□□□ -2.01
VPS50Q96JG6 RNU6-1143P-201ENST00000516125 104 ntBASIC2.5□□□□□ -2.01
VPS50Q96JG6 SNORA48.11-201ENST00000517015 89 ntBASIC2.5□□□□□ -2.01
VPS50Q96JG6 AC022616.8-201ENST00000533569 253 ntBASIC2.5□□□□□ -2.01
VPS50Q96JG6 MIR4423-201ENST00000580922 80 ntBASIC2.5□□□□□ -2.01
VPS50Q96JG6 AL109918.3-201ENST00000603072 338 ntBASIC2.5□□□□□ -2.01
VPS50Q96JG6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
VPS50Q96JG6 AC007336.1-201ENST00000576365 3828 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS50Q96JG6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 Y_RNA.84-201ENST00000363011 104 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 Y_RNA.101-201ENST00000363154 102 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 MIR548B-201ENST00000385247 97 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 RNU2-52P-201ENST00000410680 190 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 RNU2-63P-201ENST00000410792 194 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 RNA5SP508-201ENST00000411327 119 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS50Q96JG6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS50Q96JG6 RPS12P2-201ENST00000439728 269 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 HMGN2P18-201ENST00000450680 270 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 RPL23AP3-201ENST00000453844 468 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS50Q96JG6 RNA5SP282-201ENST00000516355 108 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS50Q96JG6 AC009127.3-201ENST00000570531 403 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS50Q96JG6 AC004467.1-201ENST00000615678 330 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS50Q96JG6 AC091932.3-201ENST00000624223 323 ntBASIC2.49□□□□□ -2.01
VPS50Q96JG6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS50Q96JG6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS50Q96JG6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 332.7 ms