Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 MUC2-202ENST00000613187 4845 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 SNORD114-10-201ENST00000363409 72 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 RNU6-1083P-201ENST00000384022 107 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 SNORA24-201ENST00000384096 131 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 RN7SKP213-201ENST00000410746 298 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 SRIP3-201ENST00000413200 219 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 RNU7-73P-201ENST00000458743 63 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 AP000873.1-201ENST00000463987 400 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 RN7SL443P-201ENST00000464331 290 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 RN7SL297P-201ENST00000483161 293 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 SEM1P1-201ENST00000506694 209 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 AC027308.1-201ENST00000517993 110 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 AC044860.2-201ENST00000561005 179 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 MIR8069-1-201ENST00000616627 86 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 NEAT1_2.1-201ENST00000620525 105 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 MIR8069-2-201ENST00000621412 86 ntBASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
MS4A3Q96HJ5 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 SNORD115-31-201ENST00000365318 82 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 SNORA2.3-201ENST00000383920 135 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 SNORA70-201ENST00000384436 135 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 MIR105-2-201ENST00000385083 81 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 RPL23AP27-201ENST00000415161 451 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 AC245047.7-201ENST00000440265 293 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 AL161788.1-201ENST00000441805 169 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 RNU7-85P-201ENST00000458851 63 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 AC006483.1-201ENST00000487308 313 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 VWA8P1-201ENST00000510889 176 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 AC011447.4-201ENST00000587562 111 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 AP001362.1-201ENST00000625165 124 ntBASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MS4A3Q96HJ5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 AL022322.2-201ENST00000624072 20397 ntBASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 Y_RNA.370-201ENST00000365589 108 ntBASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 AC093162.1-201ENST00000419682 124 ntBASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 AC073850.1-201ENST00000449243 255 ntBASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 RPS23P1-201ENST00000491662 432 ntBASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 RN7SKP260-201ENST00000516907 149 ntBASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 SNORA31.21-201ENST00000517180 77 ntBASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
MS4A3Q96HJ5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 snoU13.20-201ENST00000459180 104 ntBASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 TRBV12-1-201ENST00000479785 344 ntBASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 MIR4691-201ENST00000583764 85 ntBASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.41□□□□□ -1.7
MS4A3Q96HJ5 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
MS4A3Q96HJ5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
MS4A3Q96HJ5 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
MS4A3Q96HJ5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
MS4A3Q96HJ5 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
MS4A3Q96HJ5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
MS4A3Q96HJ5 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
MS4A3Q96HJ5 RNA5SP167-201ENST00000365461 116 ntBASIC4.4□□□□□ -1.71
MS4A3Q96HJ5 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.4□□□□□ -1.71
MS4A3Q96HJ5 AC245047.3-201ENST00000429428 127 ntBASIC4.4□□□□□ -1.71
MS4A3Q96HJ5 RNU7-137P-201ENST00000516788 62 ntBASIC4.4□□□□□ -1.71
MS4A3Q96HJ5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.4□□□□□ -1.71
MS4A3Q96HJ5 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.4□□□□□ -1.71
MS4A3Q96HJ5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.4□□□□□ -1.71
MS4A3Q96HJ5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms