Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.4□□□□□ -1.87
SHISA4Q96DD7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.4□□□□□ -1.87
SHISA4Q96DD7 SNORD11B-201ENST00000607707 90 ntBASIC3.4□□□□□ -1.87
SHISA4Q96DD7 AC010329.5-201ENST00000623497 2174 ntBASIC3.4□□□□□ -1.87
SHISA4Q96DD7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SHISA4Q96DD7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SHISA4Q96DD7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SHISA4Q96DD7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.4□□□□□ -1.87
SHISA4Q96DD7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SHISA4Q96DD7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SHISA4Q96DD7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHISA4Q96DD7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.39□□□□□ -1.87
SHISA4Q96DD7 RNU6-270P-201ENST00000364131 105 ntBASIC3.39□□□□□ -1.87
SHISA4Q96DD7 RNU6-454P-201ENST00000364292 107 ntBASIC3.39□□□□□ -1.87
SHISA4Q96DD7 Y_RNA.293-201ENST00000364908 93 ntBASIC3.39□□□□□ -1.87
SHISA4Q96DD7 RNU4-11P-201ENST00000365287 132 ntBASIC3.39□□□□□ -1.87
SHISA4Q96DD7 MIR539-201ENST00000365690 78 ntBASIC3.39□□□□□ -1.87
SHISA4Q96DD7 MIR626-201ENST00000385032 94 ntBASIC3.39□□□□□ -1.87
SHISA4Q96DD7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.39□□□□□ -1.87
SHISA4Q96DD7 RPL31P41-201ENST00000477967 372 ntBASIC3.39□□□□□ -1.87
SHISA4Q96DD7 SNORA25.12-201ENST00000516202 82 ntBASIC3.39□□□□□ -1.87
SHISA4Q96DD7 RNU6-344P-201ENST00000516635 111 ntBASIC3.39□□□□□ -1.87
SHISA4Q96DD7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHISA4Q96DD7 AC090616.3-201ENST00000582184 217 ntBASIC3.39□□□□□ -1.87
SHISA4Q96DD7 AL034555.1-201ENST00000604816 211 ntBASIC3.39□□□□□ -1.87
SHISA4Q96DD7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHISA4Q96DD7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHISA4Q96DD7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SHISA4Q96DD7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SHISA4Q96DD7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHISA4Q96DD7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHISA4Q96DD7 RNU6-199P-201ENST00000362954 107 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 Y_RNA.127-201ENST00000363386 109 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 Y_RNA.261-201ENST00000364631 102 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 Y_RNA.337-201ENST00000365312 102 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 RNU1-101P-201ENST00000391171 127 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 AL031003.1-201ENST00000404229 172 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 YPEL5P1-201ENST00000419731 367 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 MTND4LP9-201ENST00000427694 174 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 AL441985.1-201ENST00000457727 251 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 SNORD109B-201ENST00000458961 67 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 SNORD109A-201ENST00000459128 67 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 RN7SL633P-201ENST00000488974 297 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 AC006445.2-201ENST00000510061 472 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.38□□□□□ -1.87
SHISA4Q96DD7 PCGEM1.1-201ENST00000613431 131 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 Y_RNA.802-201ENST00000614892 130 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 TCL6_2.1-201ENST00000615162 119 ntBASIC3.38□□□□□ -1.87
SHISA4Q96DD7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
SHISA4Q96DD7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHISA4Q96DD7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SHISA4Q96DD7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.37□□□□□ -1.87
SHISA4Q96DD7 RNU6-215P-201ENST00000365169 102 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 RNU6-19P-201ENST00000384718 107 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 MIR181B1-201ENST00000385240 110 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 SNORA26.5-201ENST00000391215 123 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 PTGES3P4-201ENST00000426243 356 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 AL513328.1-201ENST00000446460 224 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 RNU6-1333P-201ENST00000516162 93 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 RNU6-971P-201ENST00000516920 106 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 DEFB131C-201ENST00000528817 165 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 MIR3609-201ENST00000582661 80 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 RNU6-91P-201ENST00000607774 107 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 AC004832.5-201ENST00000608677 401 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 AL110115.1-201ENST00000614396 364 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 AC005562.2-201ENST00000618264 111 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 AC068205.3-201ENST00000636385 468 ntBASIC3.37□□□□□ -1.87
SHISA4Q96DD7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.37□□□□□ -1.87
SHISA4Q96DD7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHISA4Q96DD7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.36□□□□□ -1.87
SHISA4Q96DD7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.36□□□□□ -1.87
SHISA4Q96DD7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.36□□□□□ -1.87
SHISA4Q96DD7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHISA4Q96DD7 Y_RNA.71-201ENST00000362892 104 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 SNORD115-30-201ENST00000364117 82 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 SNORA72.4-201ENST00000384174 132 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 RNU6-748P-201ENST00000384648 107 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHISA4Q96DD7 AL355497.1-201ENST00000406262 551 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.36□□□□□ -1.87
SHISA4Q96DD7 AC087499.2-201ENST00000432861 149 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.36□□□□□ -1.87
SHISA4Q96DD7 RNU1-61P-201ENST00000516107 151 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 RN7SKP43-201ENST00000516173 320 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 SNORD19.2-201ENST00000516978 73 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.36□□□□□ -1.87
SHISA4Q96DD7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.36□□□□□ -1.87
SHISA4Q96DD7 AC109810.1-201ENST00000534066 224 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 EIF4A1P12-201ENST00000551910 141 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 MIR4474-201ENST00000579189 78 ntBASIC3.36□□□□□ -1.87
SHISA4Q96DD7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SHISA4Q96DD7 AL136164.4-201ENST00000625013 2135 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHISA4Q96DD7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
SHISA4Q96DD7 AC134026.1-201ENST00000623249 2239 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHISA4Q96DD7 U3.9-201ENST00000363823 204 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 snoU2_19.4-201ENST00000364329 80 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 SNORD116-14-201ENST00000383894 92 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms