Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AP001596.2-201ENST00000608410 312 ntBASIC0.3□□□□□ -2.36
TOPBP1Q92547 AC018645.2-201ENST00000609151 472 ntBASIC0.3□□□□□ -2.36
TOPBP1Q92547 AC240442.1-201ENST00000616055 283 ntBASIC0.3□□□□□ -2.36
TOPBP1Q92547 AC073349.3-201ENST00000617616 186 ntBASIC0.3□□□□□ -2.36
TOPBP1Q92547 uc_338.11-201ENST00000619132 160 ntBASIC0.3□□□□□ -2.36
TOPBP1Q92547 AC068792.1-201ENST00000621354 417 ntBASIC0.3□□□□□ -2.36
TOPBP1Q92547 AC022418.1-201ENST00000624118 445 ntBASIC0.3□□□□□ -2.36
TOPBP1Q92547 RNU5E-5P-201ENST00000365379 116 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 SNORA2.2-201ENST00000365473 135 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 SNORD116-13-201ENST00000384408 92 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 MIR586-201ENST00000385035 97 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 RNU6-1106P-201ENST00000390845 107 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.29□□□□□ -2.36
TOPBP1Q92547 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.29□□□□□ -2.36
TOPBP1Q92547 AC104850.1-201ENST00000435940 476 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.29□□□□□ -2.36
TOPBP1Q92547 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.29□□□□□ -2.36
TOPBP1Q92547 snoU13.6-201ENST00000458785 104 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.29□□□□□ -2.36
TOPBP1Q92547 Vault.3-201ENST00000516676 95 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 AC025647.1-201ENST00000517879 253 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.29□□□□□ -2.36
TOPBP1Q92547 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.29□□□□□ -2.36
TOPBP1Q92547 MIR4778-201ENST00000577635 80 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 SNRPGP20-201ENST00000604477 205 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 AC002044.1-201ENST00000606707 158 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.29□□□□□ -2.36
TOPBP1Q92547 SEPT14P19-203ENST00000633205 211 ntBASIC0.29□□□□□ -2.36
TOPBP1Q92547 RNU6-1029P-201ENST00000384109 107 ntBASIC0.28□□□□□ -2.36
TOPBP1Q92547 CDK8P2-201ENST00000415020 547 ntBASIC0.28□□□□□ -2.36
TOPBP1Q92547 EPS15P1-201ENST00000448836 336 ntBASIC0.28□□□□□ -2.36
TOPBP1Q92547 USP9YP12-201ENST00000450481 570 ntBASIC0.28□□□□□ -2.36
TOPBP1Q92547 LINC01399-202ENST00000458450 244 ntBASIC0.28□□□□□ -2.36
TOPBP1Q92547 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.28□□□□□ -2.36
TOPBP1Q92547 AC016256.1-201ENST00000547971 354 ntBASIC0.28□□□□□ -2.36
TOPBP1Q92547 MTND4P33-201ENST00000556706 766 ntBASIC0.28□□□□□ -2.36
TOPBP1Q92547 SNORD18A-201ENST00000363753 72 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 Y_RNA.552-201ENST00000384665 112 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 RNU6-1237P-201ENST00000384777 107 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 SNORD41-201ENST00000386967 70 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 MIR454-201ENST00000390180 115 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 SNORD89-201ENST00000390981 114 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 Y_RNA.598-201ENST00000410480 95 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 Y_RNA.610-201ENST00000410681 103 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 MTND3P17-201ENST00000416968 344 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC106883.1-201ENST00000418805 562 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.28□□□□□ -2.37
TOPBP1Q92547 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC079781.2-201ENST00000446424 169 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC009237.7-201ENST00000447357 229 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC233266.1-201ENST00000454518 96 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 MTATP6P14-201ENST00000455189 673 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC022364.2-201ENST00000457963 554 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 RNU7-94P-201ENST00000459576 63 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 RNU2-46P-201ENST00000517038 113 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
TOPBP1Q92547 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC026470.2-201ENST00000561492 181 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC091304.9-201ENST00000612091 226 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC242852.1-201ENST00000612151 96 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 AC244015.1-201ENST00000622301 99 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 snoZ196.1-201ENST00000625269 89 ntBASIC0.28□□□□□ -2.37
TOPBP1Q92547 SCARNA18-201ENST00000459004 134 ntBASIC0.27□□□□□ -2.37
TOPBP1Q92547 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.27□□□□□ -2.37
TOPBP1Q92547 RNU2-69P-201ENST00000516061 100 ntBASIC0.27□□□□□ -2.37
TOPBP1Q92547 AC069113.1-201ENST00000517763 267 ntBASIC0.27□□□□□ -2.37
TOPBP1Q92547 MIR3941-201ENST00000582572 103 ntBASIC0.27□□□□□ -2.37
TOPBP1Q92547 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
TOPBP1Q92547 RNU5F-7P-201ENST00000363696 115 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 RNU6-1335P-201ENST00000365426 107 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 MIR1-2-201ENST00000384961 85 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 SNORA75.2-201ENST00000391138 150 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 SNORA75.3-201ENST00000391231 150 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 AL355143.1-201ENST00000407101 841 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 AC004866.1-201ENST00000411748 78 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 RPS3AP3-201ENST00000411933 242 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 MTCO2P3-201ENST00000442543 421 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 RNU6-221P-201ENST00000459541 99 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 AL049830.1-201ENST00000468034 425 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.26□□□□□ -2.37
TOPBP1Q92547 AC010493.1-201ENST00000513479 292 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 RNU7-99P-201ENST00000516271 62 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 RNU6-917P-201ENST00000516294 104 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 Y_RNA.700-201ENST00000516806 100 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 RNU6-410P-201ENST00000517006 107 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 AC027419.1-201ENST00000522976 328 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 SUB1P2-201ENST00000556401 297 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 MTND4P9-201ENST00000507819 1346 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 MTND4P5-201ENST00000435821 1374 ntBASIC0.26□□□□□ -2.37
TOPBP1Q92547 RNU6-74P-201ENST00000384235 107 ntBASIC0.25□□□□□ -2.37
TOPBP1Q92547 Y_RNA.457-201ENST00000384237 111 ntBASIC0.25□□□□□ -2.37
TOPBP1Q92547 SNORA67.2-201ENST00000384300 149 ntBASIC0.25□□□□□ -2.37
TOPBP1Q92547 MIR122-201ENST00000385044 85 ntBASIC0.25□□□□□ -2.37
TOPBP1Q92547 SNORA16.2-201ENST00000390991 127 ntBASIC0.25□□□□□ -2.37
TOPBP1Q92547 RNA5SP494-201ENST00000410653 129 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms