Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 TPT1P7-201ENST00000458300 517 ntBASIC0.46□□□□□ -2.34
CCDC12Q8WUD4 RNU7-99P-201ENST00000516271 62 ntBASIC0.46□□□□□ -2.34
CCDC12Q8WUD4 RNU6-344P-201ENST00000516635 111 ntBASIC0.46□□□□□ -2.34
CCDC12Q8WUD4 RNU1-117P-201ENST00000517041 158 ntBASIC0.46□□□□□ -2.34
CCDC12Q8WUD4 RNA5SP454-201ENST00000517231 127 ntBASIC0.46□□□□□ -2.34
CCDC12Q8WUD4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.46□□□□□ -2.34
CCDC12Q8WUD4 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
CCDC12Q8WUD4 AL357312.1-201ENST00000603879 298 ntBASIC0.46□□□□□ -2.34
CCDC12Q8WUD4 AC011458.1-201ENST00000604034 617 ntBASIC0.46□□□□□ -2.34
CCDC12Q8WUD4 AC009161.2-201ENST00000624626 138 ntBASIC0.46□□□□□ -2.34
CCDC12Q8WUD4 RNU6-181P-201ENST00000363225 107 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 Y_RNA.123-201ENST00000363338 102 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 RNU6-1317P-201ENST00000364582 104 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 SNORA2.2-201ENST00000365473 135 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 Y_RNA.560-201ENST00000384689 102 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 BX295541.1-201ENST00000417774 250 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 CALM2P4-201ENST00000430810 426 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 RPL39P39-201ENST00000455840 151 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 RNU6-445P-201ENST00000516949 107 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 AC106038.2-201ENST00000520706 568 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 AP002963.1-201ENST00000530590 184 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 FRG2DP-202ENST00000566967 323 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 FGF7P1-201ENST00000582820 288 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 ZNF204P-201ENST00000416749 2397 ntBASIC0.45□□□□□ -2.34
CCDC12Q8WUD4 RNU6-424P-201ENST00000384367 105 ntBASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 AC093850.1-201ENST00000454121 251 ntBASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 SNORD11.1-201ENST00000459482 85 ntBASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 MTND3P3-201ENST00000505004 126 ntBASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 SNORA18.6-201ENST00000516792 115 ntBASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 AL096861.1-201ENST00000610899 123 ntBASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 AC087683.2-201ENST00000611384 326 ntBASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 OR5AK4P-201ENST00000635912 903 ntBASIC0.44□□□□□ -2.34
CCDC12Q8WUD4 U8.16-201ENST00000391279 133 ntBASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 AC133104.1-201ENST00000429100 218 ntBASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 AC245047.8-201ENST00000456455 284 ntBASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 RNU7-180P-201ENST00000459240 63 ntBASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 AC022493.2-201ENST00000506122 481 ntBASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 Y_RNA.673-201ENST00000516306 88 ntBASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 AC027419.1-201ENST00000522976 328 ntBASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 HIF1AP1-201ENST00000553642 175 ntBASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.43□□□□□ -2.34
CCDC12Q8WUD4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 USP9YP29-201ENST00000445112 563 ntBASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 RNU7-94P-201ENST00000459576 63 ntBASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 CCDC34P1-201ENST00000507441 517 ntBASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 RNU4-57P-201ENST00000515980 135 ntBASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 RNA5SP436-201ENST00000516020 115 ntBASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 MTND1P5-201ENST00000517906 940 ntBASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 AC090616.2-202ENST00000584248 222 ntBASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 AL391903.3-201ENST00000612158 163 ntBASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 AC137590.2-201ENST00000619709 240 ntBASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
CCDC12Q8WUD4 AL589743.1-201ENST00000551932 2712 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 RNA5SP219-201ENST00000390940 113 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 AL031577.2-201ENST00000404133 280 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 SNORD99-201ENST00000408612 74 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 MIR1185-2-201ENST00000408687 86 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 RNU6-584P-201ENST00000410350 95 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 CYCSP46-201ENST00000423569 204 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 U8.21-201ENST00000459536 136 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 SNORD42A-201ENST00000459584 64 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 RNU6-1129P-201ENST00000515964 104 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 SNORA70.12-201ENST00000516084 153 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 SNORA14.1-201ENST00000516113 141 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 AC104576.1-201ENST00000524225 88 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 AK6P2-201ENST00000549020 471 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 SNORA28-201ENST00000606769 126 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 SNORD11B-201ENST00000607707 90 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 AC004832.4-201ENST00000608952 331 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 HULC.1-201ENST00000612720 240 ntBASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CCDC12Q8WUD4 SNORD87-201ENST00000364849 89 ntBASIC0.4□□□□□ -2.35
CCDC12Q8WUD4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
CCDC12Q8WUD4 RNU6-517P-201ENST00000384362 110 ntBASIC0.4□□□□□ -2.35
CCDC12Q8WUD4 MIR598-201ENST00000384868 97 ntBASIC0.4□□□□□ -2.35
CCDC12Q8WUD4 MIR320B2-201ENST00000408479 138 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms