Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 RNU6-1228P-201ENST00000391014 107 ntBASIC3.12□□□□□ -1.91
NUP43Q8NFH3 RNU6-383P-201ENST00000410864 94 ntBASIC3.12□□□□□ -1.91
NUP43Q8NFH3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 AL121890.1-201ENST00000435457 205 ntBASIC3.12□□□□□ -1.91
NUP43Q8NFH3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 AC117454.1-201ENST00000491120 168 ntBASIC3.12□□□□□ -1.91
NUP43Q8NFH3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
NUP43Q8NFH3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUP43Q8NFH3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUP43Q8NFH3 Y_RNA.71-201ENST00000362892 104 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 Y_RNA.420-201ENST00000384043 110 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 SNORA20B-201ENST00000384220 132 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 RNU1-101P-201ENST00000391171 127 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 MIR1283-1-201ENST00000408494 87 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 HSPE1P21-201ENST00000438283 308 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 HSPE1P13-201ENST00000451143 297 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 RN7SL293P-201ENST00000481765 281 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 MIR449C-201ENST00000516047 92 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 RNU6-1337P-201ENST00000516525 95 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 AC112693.2-201ENST00000556538 232 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.11□□□□□ -1.91
NUP43Q8NFH3 AC103810.1-201ENST00000579873 453 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 LARP7P3-201ENST00000579888 337 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 MIR4513-201ENST00000581077 86 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUP43Q8NFH3 AC008739.2-201ENST00000597006 317 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 uc_338.1-201ENST00000612113 180 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.11□□□□□ -1.91
NUP43Q8NFH3 U6.105-201ENST00000637379 88 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 AC068647.2-201ENST00000637380 353 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 AL159152.1-201ENST00000635019 2587 ntBASIC3.11□□□□□ -1.91
NUP43Q8NFH3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUP43Q8NFH3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
NUP43Q8NFH3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NUP43Q8NFH3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
NUP43Q8NFH3 RNU6-199P-201ENST00000362954 107 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 SNORD116-14-201ENST00000383894 92 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 SNORD116-17-201ENST00000383929 92 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 SNORD116-15-201ENST00000384445 92 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 Y_RNA.542-201ENST00000384641 111 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 SNORD116-19-201ENST00000384729 92 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 SNORA36B-201ENST00000410438 131 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 AC009414.1-201ENST00000427200 443 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 AC114982.1-201ENST00000469402 321 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 RPS27P26-201ENST00000494583 239 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 AC093663.1-201ENST00000497190 394 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
NUP43Q8NFH3 RNU6-1333P-201ENST00000516162 93 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 AC005000.2-201ENST00000605468 310 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 MIR7975-201ENST00000619350 68 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 AC090517.3-201ENST00000625170 141 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 ZNF702P-202ENST00000434269 1966 ntBASIC3.1□□□□□ -1.91
NUP43Q8NFH3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NUP43Q8NFH3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NUP43Q8NFH3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.09□□□□□ -1.91
NUP43Q8NFH3 SNORA27.1-201ENST00000362604 124 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 RNU1-105P-201ENST00000363470 161 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 SNORD20-201ENST00000384550 80 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 MIR300-201ENST00000401138 83 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 MIR1278-201ENST00000408753 81 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 CST9LP2-201ENST00000437612 320 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 RPL23AP58-201ENST00000440453 469 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.09□□□□□ -1.91
NUP43Q8NFH3 RNU7-14P-201ENST00000459331 62 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 RNU7-57P-201ENST00000459540 60 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 RPS26P55-201ENST00000471178 356 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 MIR4276-201ENST00000584832 70 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 MIR4765-201ENST00000585007 77 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.09□□□□□ -1.91
NUP43Q8NFH3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NUP43Q8NFH3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.09□□□□□ -1.91
NUP43Q8NFH3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
NUP43Q8NFH3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NUP43Q8NFH3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
NUP43Q8NFH3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NUP43Q8NFH3 RNU1-70P-201ENST00000362618 164 ntBASIC3.08□□□□□ -1.92
NUP43Q8NFH3 RNU1-72P-201ENST00000362976 153 ntBASIC3.08□□□□□ -1.92
NUP43Q8NFH3 RNU6-944P-201ENST00000364023 107 ntBASIC3.08□□□□□ -1.92
NUP43Q8NFH3 Y_RNA.273-201ENST00000364703 102 ntBASIC3.08□□□□□ -1.92
NUP43Q8NFH3 RNU6-215P-201ENST00000365169 102 ntBASIC3.08□□□□□ -1.92
NUP43Q8NFH3 RNU6-728P-201ENST00000365375 104 ntBASIC3.08□□□□□ -1.92
NUP43Q8NFH3 Y_RNA.353-201ENST00000365440 108 ntBASIC3.08□□□□□ -1.92
NUP43Q8NFH3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.08□□□□□ -1.92
NUP43Q8NFH3 RNU6-768P-201ENST00000384683 107 ntBASIC3.08□□□□□ -1.92
NUP43Q8NFH3 MIR518C-201ENST00000384822 101 ntBASIC3.08□□□□□ -1.92
NUP43Q8NFH3 RNU4-43P-201ENST00000410628 137 ntBASIC3.08□□□□□ -1.92
NUP43Q8NFH3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms