Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RNU6-137P-201ENST00000363680 108 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 Y_RNA.373-201ENST00000365600 103 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 RNU6-17P-201ENST00000384245 107 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 RNU6-18P-201ENST00000384527 107 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 MIR758-201ENST00000390227 88 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 RNU6-174P-201ENST00000410406 106 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 CYCSP49-201ENST00000420810 319 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 RAB28P5-201ENST00000427490 651 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 MTATP6P17-201ENST00000431030 672 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 DAP3P1-201ENST00000441522 278 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 AC107401.1-201ENST00000503426 685 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 RNU6-1281P-201ENST00000516223 105 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 RNU6-1198P-201ENST00000516904 67 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 CYCSP23-201ENST00000519781 313 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 AP000889.1-201ENST00000530968 660 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 AL137100.2-201ENST00000555786 315 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 UBL5P4-201ENST00000562584 236 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 POLR3GP2-201ENST00000588366 668 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 AC025811.1-201ENST00000604312 472 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 AL513423.1-201ENST00000621695 132 ntBASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
MRPL55Q7Z7F7 AL391516.1-201ENST00000554380 2449 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 Y_RNA.51-201ENST00000362725 102 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 RNU6-451P-201ENST00000362921 107 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 RNU6-727P-201ENST00000363592 107 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 SNORD116-1-201ENST00000384335 95 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 MIR517A-201ENST00000385001 87 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 RNA5SP61-201ENST00000516453 100 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 MIR5696-201ENST00000578474 85 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 MIR3672-201ENST00000584290 82 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 AL162413.1-201ENST00000603198 110 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 AL021879.1-201ENST00000611756 288 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 ZNF209P-201ENST00000593450 2304 ntBASIC0.86□□□□□ -2.27
MRPL55Q7Z7F7 ZNF72P-201ENST00000425869 1908 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 RNU4-13P-201ENST00000364019 141 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 MIR660-201ENST00000385235 97 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 AC010095.1-201ENST00000443543 144 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 TRBVA-201ENST00000498804 316 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 RN7SKP49-201ENST00000516675 260 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 PIGPP4-201ENST00000584447 307 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 AL513534.2-201ENST00000603836 250 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 AL645939.4-201ENST00000604495 135 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 AC073349.3-201ENST00000617616 186 ntBASIC0.85□□□□□ -2.27
MRPL55Q7Z7F7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 Y_RNA.38-201ENST00000362617 102 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 Y_RNA.212-201ENST00000364177 102 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 SNORA22-201ENST00000383907 134 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 RNU6-793P-201ENST00000384233 104 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 SNORA22C-201ENST00000384614 134 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 SNORD41-201ENST00000386967 70 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 AL034345.1-201ENST00000407768 123 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 MIR1261-201ENST00000408659 82 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 RPL30P16-201ENST00000419341 429 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 MRPL35P3-201ENST00000421557 364 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 MTND4P18-201ENST00000447010 465 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 SNORD65B-201ENST00000459126 73 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 RN7SL429P-201ENST00000479090 223 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 RN7SL489P-201ENST00000486185 223 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 RN7SL327P-201ENST00000488659 223 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 RNU6-256P-201ENST00000516747 97 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 RNU6-922P-201ENST00000516753 99 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 RN7SL853P-201ENST00000617250 223 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 MIR7843-201ENST00000622274 79 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 AC106754.2-201ENST00000623006 233 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 SNORD3E-202ENST00000627253 216 ntBASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.84□□□□□ -2.27
MRPL55Q7Z7F7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
MRPL55Q7Z7F7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
MRPL55Q7Z7F7 RNY3P3-201ENST00000363816 102 ntBASIC0.83□□□□□ -2.28
MRPL55Q7Z7F7 Y_RNA.530-201ENST00000384587 101 ntBASIC0.83□□□□□ -2.28
MRPL55Q7Z7F7 MIR19B1-201ENST00000384829 87 ntBASIC0.83□□□□□ -2.28
MRPL55Q7Z7F7 MIR10B-201ENST00000385011 110 ntBASIC0.83□□□□□ -2.28
MRPL55Q7Z7F7 MIR653-201ENST00000385279 96 ntBASIC0.83□□□□□ -2.28
MRPL55Q7Z7F7 RNU2-16P-201ENST00000410712 136 ntBASIC0.83□□□□□ -2.28
MRPL55Q7Z7F7 RNU6-1054P-201ENST00000411293 104 ntBASIC0.83□□□□□ -2.28
MRPL55Q7Z7F7 ZNF885P-201ENST00000420174 1098 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms