Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC068790.2-201ENST00000602601 557 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 MTND3P19-201ENST00000603825 345 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AC104458.1-201ENST00000608243 463 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AC063943.3-201ENST00000615562 356 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AC104260.1-201ENST00000616660 539 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 RNU6-289P-201ENST00000364093 107 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 MIR10A-201ENST00000385043 110 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 RNU6-747P-201ENST00000390928 104 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 RNU6-241P-201ENST00000391148 104 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AL049545.1-201ENST00000401856 572 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 MTCO2P23-201ENST00000425216 680 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 USP9YP28-201ENST00000435142 589 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 MTCO1P27-201ENST00000448269 226 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AL163973.1-201ENST00000484753 577 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 SNORA43.2-201ENST00000516652 128 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AP001372.4-201ENST00000524889 472 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 DEFB131D-201ENST00000526803 184 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AC023050.3-201ENST00000541142 333 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 MIR4324-201ENST00000584846 72 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AC121334.2-201ENST00000605387 271 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AC009994.1-201ENST00000606889 253 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AC131159.1-201ENST00000621854 213 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AL157770.1-201ENST00000623049 439 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 AC098679.4-201ENST00000624241 654 ntBASIC-0.38□□□□□ -2.47
CSPG4Q6UVK1 U3.4-201ENST00000363352 213 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU6-815P-201ENST00000384080 113 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU6-481P-201ENST00000384194 107 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 MTCO1P5-201ENST00000433573 344 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU6-848P-201ENST00000515948 107 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU6-617P-201ENST00000516147 107 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU6-473P-201ENST00000516164 107 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU6-158P-201ENST00000517104 100 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AP002453.2-201ENST00000533503 320 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 MIR3192-201ENST00000584920 77 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AC097478.2-201ENST00000610572 514 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AL162376.1-201ENST00000624117 175 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AC099654.8-201ENST00000637757 681 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 MIR1322-201ENST00000638013 71 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 U4.7-201ENST00000638126 106 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AC092104.1-201ENST00000497346 1441 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU6-817P-201ENST00000391083 104 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNA5SP95-201ENST00000410319 137 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 MTND3P17-201ENST00000416968 344 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 MTND1P4-201ENST00000435196 415 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 MTND4P15-201ENST00000437913 1033 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU6-897P-201ENST00000517135 105 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AK6P2-201ENST00000549020 471 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AC018448.1-201ENST00000552843 316 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RPL21P9-201ENST00000556149 474 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AC174048.1-201ENST00000603389 144 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AC022893.3-201ENST00000607665 437 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AC063944.3-201ENST00000609969 533 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 uc_338.36-201ENST00000622331 158 ntBASIC-0.39□□□□□ -2.47
CSPG4Q6UVK1 RNU1-76P-201ENST00000362903 159 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 MIR644A-201ENST00000385262 94 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 SNORD100-201ENST00000408573 76 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 RNU2-62P-201ENST00000410868 191 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 USP9YP21-201ENST00000420603 432 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 AL122001.1-201ENST00000457027 370 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 AC026414.1-201ENST00000504046 698 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 AC021451.1-201ENST00000523498 1129 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 AL512347.1-201ENST00000566420 503 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 AC064872.1-201ENST00000604823 1072 ntBASIC-0.4□□□□□ -2.47
CSPG4Q6UVK1 SNORD114-14-201ENST00000362723 75 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 RNA5SP192-201ENST00000364404 120 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 U8.5-201ENST00000364528 136 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 RNU6-378P-201ENST00000384324 107 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 RNU6-424P-201ENST00000384367 105 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 MIR301A-201ENST00000385261 86 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 RNU6-440P-201ENST00000390882 105 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 SNORA26-201ENST00000391286 122 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 MIR1253-201ENST00000408273 105 ntBASIC-0.41□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms