Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 RNA5SP490-201ENST00000517141 136 ntBASIC3.25□□□□□ -1.89
LRFN4Q6PJG9 AC090115.4-201ENST00000609970 188 ntBASIC3.25□□□□□ -1.89
LRFN4Q6PJG9 MIR8058-201ENST00000615737 89 ntBASIC3.25□□□□□ -1.89
LRFN4Q6PJG9 MIR1248-201ENST00000629190 106 ntBASIC3.25□□□□□ -1.89
LRFN4Q6PJG9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRFN4Q6PJG9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRFN4Q6PJG9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
LRFN4Q6PJG9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRFN4Q6PJG9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRFN4Q6PJG9 AC080128.1-201ENST00000474389 1917 ntBASIC3.25□□□□□ -1.89
LRFN4Q6PJG9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 SNORD45.3-201ENST00000363836 72 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 RNU4-41P-201ENST00000364426 143 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 RNU6-117P-201ENST00000365415 107 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 SNORD116-14-201ENST00000383894 92 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 SNORD116-17-201ENST00000383929 92 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 SNORA72-201ENST00000384339 132 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 SNORD116-15-201ENST00000384445 92 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 SNORD116-19-201ENST00000384729 92 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 SNORA11-201ENST00000408789 128 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 RNA5SP511-201ENST00000410487 115 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 RNU2-32P-201ENST00000411193 191 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 AC016909.1-201ENST00000415916 166 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 AC006989.1-201ENST00000427212 131 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 CYP2C59P-201ENST00000457790 269 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 RPL27AP5-201ENST00000469428 449 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 AC092185.1-201ENST00000491371 97 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 AC015720.1-201ENST00000565251 277 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 AP000553.6-201ENST00000641242 118 ntBASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRFN4Q6PJG9 ZNF702P-202ENST00000434269 1966 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 Y_RNA.81-201ENST00000362997 102 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 Y_RNA.218-201ENST00000364218 104 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 SNORA68.1-201ENST00000364537 132 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 Y_RNA.542-201ENST00000384641 111 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 SNORA75.5-201ENST00000391291 81 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 FO393413.1-201ENST00000402892 195 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 Y_RNA.622-201ENST00000411091 108 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 SNORA57.3-201ENST00000411095 141 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 RNU2-55P-201ENST00000411146 174 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 AL357134.1-201ENST00000445848 426 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 AC090515.1-201ENST00000465295 476 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 AC107934.2-201ENST00000518653 310 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 AL021707.8-201ENST00000609428 183 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 SNORA50A-202ENST00000629536 136 ntBASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.23□□□□□ -1.89
LRFN4Q6PJG9 AL161912.2-201ENST00000565707 3007 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 Y_RNA.71-201ENST00000362892 104 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 MIR95-201ENST00000385072 81 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 Y_RNA.587-201ENST00000391210 103 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 AL161788.1-201ENST00000441805 169 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 RNU6-1211P-201ENST00000459179 105 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 AC092991.1-201ENST00000477176 376 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 CKS1BP2-201ENST00000497342 240 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 AC110768.1-201ENST00000509222 400 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 RNU6-1333P-201ENST00000516162 93 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 AC034229.5-201ENST00000624258 185 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 AP001340.1-201ENST00000624405 217 ntBASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
LRFN4Q6PJG9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 RNU1-22P-201ENST00000363334 158 ntBASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 RNA5SP42-201ENST00000364278 115 ntBASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 Y_RNA.273-201ENST00000364703 102 ntBASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 RNA5SP51-201ENST00000364750 119 ntBASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 RNU6-283P-201ENST00000364788 107 ntBASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 RNU6-597P-201ENST00000365620 102 ntBASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 RNU6-80P-201ENST00000384195 107 ntBASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 SNRPGP8-201ENST00000454064 226 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms