Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 SNRPGP19-201ENST00000603826 189 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 SNRPGP20-201ENST00000604477 205 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 TCL6_2.1-201ENST00000615162 119 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 AL160413.1-201ENST00000622780 310 ntBASIC1.56□□□□□ -2.16
ZNF544Q6NX49 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
ZNF544Q6NX49 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 AC006026.1-201ENST00000444025 1803 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 RNU1-62P-201ENST00000362599 164 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.112-201ENST00000363250 102 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 RNU5F-3P-201ENST00000363767 117 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.252-201ENST00000364556 101 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 RNU6-99P-201ENST00000364721 107 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.332-201ENST00000365271 113 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 SNORA18.2-201ENST00000383865 132 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 MIR9-3-201ENST00000385084 90 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.579-201ENST00000390939 94 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 HMGN2P39-201ENST00000398005 273 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 MIR320B2-201ENST00000408479 138 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 CYCSP49-201ENST00000420810 319 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 AC018865.2-201ENST00000423631 129 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 EIF1P2-201ENST00000428233 350 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.55□□□□□ -2.16
ZNF544Q6NX49 RPL23AP50-201ENST00000434149 455 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 AC099799.1-201ENST00000439809 192 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 TOMM22P6-201ENST00000465035 409 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.55□□□□□ -2.16
ZNF544Q6NX49 HMGN1P13-201ENST00000505795 138 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 ATP5EP1-201ENST00000510257 156 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 RNU6-976P-201ENST00000516086 111 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 RNA5SP458-201ENST00000516188 119 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 RNU6-1098P-201ENST00000516772 96 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 RNU6-264P-201ENST00000517134 104 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.55□□□□□ -2.16
ZNF544Q6NX49 AC090617.3-201ENST00000573670 475 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.55□□□□□ -2.16
ZNF544Q6NX49 SNRPGP17-201ENST00000603780 214 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.55□□□□□ -2.16
ZNF544Q6NX49 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.55□□□□□ -2.16
ZNF544Q6NX49 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ZNF544Q6NX49 ZNF204P-201ENST00000416749 2397 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.5-201ENST00000362334 102 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.11-201ENST00000362375 109 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.106-201ENST00000363189 100 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.197-201ENST00000364004 102 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 SNORD31B-201ENST00000364977 69 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 RNU1-115P-201ENST00000365329 160 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 SNORA67.2-201ENST00000384300 149 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 MIR625-201ENST00000385047 85 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AL357139.1-201ENST00000407792 426 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 RNU6-1156P-201ENST00000410365 100 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 RNA5SP450-201ENST00000411206 102 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AC003989.2-201ENST00000440224 169 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AC004386.2-201ENST00000441858 148 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AL137792.2-201ENST00000443484 235 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 MTCO3P8-201ENST00000453691 755 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 PRELID3BP1-201ENST00000457142 540 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AC016925.1-201ENST00000458303 298 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AC093259.1-201ENST00000509755 300 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.54□□□□□ -2.16
ZNF544Q6NX49 RNU6-1170P-201ENST00000515974 106 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 RNU6-911P-201ENST00000516523 104 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 RNU6-965P-201ENST00000516721 96 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 RNU7-4P-201ENST00000516961 62 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 RNU6-699P-201ENST00000517081 110 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 MIR2355-201ENST00000517199 87 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AC087441.2-201ENST00000529141 262 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AL080274.1-201ENST00000605565 220 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AC087588.2-201ENST00000617667 426 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AC090574.1-201ENST00000623186 233 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AC138305.3-201ENST00000624988 240 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 AC008873.1-201ENST00000625051 138 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
ZNF544Q6NX49 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
ZNF544Q6NX49 MTND5P16-201ENST00000460269 1703 ntBASIC1.54□□□□□ -2.16
ZNF544Q6NX49 RNU1-17P-201ENST00000363022 152 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 Y_RNA.99-201ENST00000363138 105 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 RNU6-873P-201ENST00000363833 107 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 RNU6-280P-201ENST00000364145 104 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 RNU4-76P-201ENST00000364509 141 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 RNU6-281P-201ENST00000384212 103 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 AC244636.1-201ENST00000421152 228 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.53□□□□□ -2.16
ZNF544Q6NX49 MRPS18CP6-201ENST00000423587 223 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 USP9YP16-201ENST00000430287 407 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 USP9YP23-201ENST00000455085 407 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 AC027575.1-201ENST00000481064 460 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 RPS23P5-201ENST00000495419 428 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.53□□□□□ -2.16
ZNF544Q6NX49 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.53□□□□□ -2.16
ZNF544Q6NX49 SNORA4.4-201ENST00000515921 135 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 MIR449C-201ENST00000516047 92 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 RNU5F-4P-201ENST00000516581 114 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 RNU6-250P-201ENST00000516958 103 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.53□□□□□ -2.16
ZNF544Q6NX49 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 MIR502-201ENST00000606349 86 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.53□□□□□ -2.16
ZNF544Q6NX49 MIR1244-1-201ENST00000612829 85 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms