Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC027176.1-201ENST00000560204 514 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 YPEL5P2-201ENST00000605553 359 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 uc_338.28-201ENST00000612082 187 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 MIR548AY-201ENST00000617669 107 ntBASIC3.62□□□□□ -1.83
RNF43Q68DV7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF43Q68DV7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF43Q68DV7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RNF43Q68DV7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF43Q68DV7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RNF43Q68DV7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF43Q68DV7 Y_RNA.116-201ENST00000363292 103 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 SNORA18.2-201ENST00000383865 132 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 RNU6-880P-201ENST00000384526 107 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 MIR607-201ENST00000385241 96 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 RNA5SP201-201ENST00000410316 124 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 CYCSP48-201ENST00000417124 323 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 AL365496.1-201ENST00000426885 215 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 AC006028.1-201ENST00000438379 402 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 Z75741.1-201ENST00000446793 314 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 EIF4A1P12-201ENST00000551910 141 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 RPL30P11-203ENST00000598995 310 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RNF43Q68DV7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF43Q68DV7 AC007656.2-201ENST00000624902 4547 ntBASIC3.61□□□□□ -1.83
RNF43Q68DV7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RNF43Q68DV7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.6□□□□□ -1.83
RNF43Q68DV7 SNORA67.2-201ENST00000384300 149 ntBASIC3.6□□□□□ -1.83
RNF43Q68DV7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.6□□□□□ -1.83
RNF43Q68DV7 MIR1289-1-201ENST00000408836 144 ntBASIC3.6□□□□□ -1.83
RNF43Q68DV7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF43Q68DV7 PHBP14-201ENST00000512887 367 ntBASIC3.6□□□□□ -1.83
RNF43Q68DV7 RNU6-781P-201ENST00000516377 101 ntBASIC3.6□□□□□ -1.83
RNF43Q68DV7 RNU6-928P-201ENST00000516876 104 ntBASIC3.6□□□□□ -1.83
RNF43Q68DV7 RNU2-60P-201ENST00000517290 128 ntBASIC3.6□□□□□ -1.83
RNF43Q68DV7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.6□□□□□ -1.83
RNF43Q68DV7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF43Q68DV7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF43Q68DV7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
RNF43Q68DV7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF43Q68DV7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF43Q68DV7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
RNF43Q68DV7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF43Q68DV7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF43Q68DV7 RNU4-35P-201ENST00000362588 141 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 RNU6-529P-201ENST00000363383 104 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 U3.8-201ENST00000363675 217 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 RNU6-978P-201ENST00000364371 103 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 MIR548B-201ENST00000385247 97 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 Y_RNA.587-201ENST00000391210 103 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 AL133475.1-201ENST00000404414 305 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 Y_RNA.617-201ENST00000410920 90 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 AL139281.1-201ENST00000422120 335 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 HMGN2P20-201ENST00000437531 273 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 RPS26P45-201ENST00000471748 340 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 AC025518.1-201ENST00000479856 347 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 AC093663.1-201ENST00000497190 394 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 RNA5SP309-201ENST00000516670 106 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 RNU2-44P-201ENST00000516795 194 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 MIR2276-201ENST00000516886 89 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 AC105137.2-201ENST00000569073 466 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF43Q68DV7 MIR4325-201ENST00000583049 90 ntBASIC3.59□□□□□ -1.83
RNF43Q68DV7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF43Q68DV7 AC010733.2-201ENST00000589496 5702 ntBASIC3.59□□□□□ -1.84
RNF43Q68DV7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.59□□□□□ -1.84
RNF43Q68DV7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF43Q68DV7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF43Q68DV7 RNU6-600P-201ENST00000362524 99 ntBASIC3.58□□□□□ -1.84
RNF43Q68DV7 RNU4-15P-201ENST00000362613 141 ntBASIC3.58□□□□□ -1.84
RNF43Q68DV7 RNU6-508P-201ENST00000363231 103 ntBASIC3.58□□□□□ -1.84
RNF43Q68DV7 Y_RNA.124-201ENST00000363339 93 ntBASIC3.58□□□□□ -1.84
RNF43Q68DV7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF43Q68DV7 Y_RNA.649-201ENST00000459077 103 ntBASIC3.58□□□□□ -1.84
RNF43Q68DV7 RNU2-58P-201ENST00000516403 183 ntBASIC3.58□□□□□ -1.84
RNF43Q68DV7 RNU6-197P-201ENST00000516680 100 ntBASIC3.58□□□□□ -1.84
RNF43Q68DV7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF43Q68DV7 AC106754.2-201ENST00000623006 233 ntBASIC3.58□□□□□ -1.84
RNF43Q68DV7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF43Q68DV7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF43Q68DV7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF43Q68DV7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF43Q68DV7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF43Q68DV7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNF43Q68DV7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF43Q68DV7 Y_RNA.40-201ENST00000362645 93 ntBASIC3.57□□□□□ -1.84
RNF43Q68DV7 MIR518C-201ENST00000384822 101 ntBASIC3.57□□□□□ -1.84
RNF43Q68DV7 COTL1P1-201ENST00000422309 375 ntBASIC3.57□□□□□ -1.84
RNF43Q68DV7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF43Q68DV7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RNF43Q68DV7 Y_RNA.690-201ENST00000516603 95 ntBASIC3.57□□□□□ -1.84
RNF43Q68DV7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF43Q68DV7 AC026333.2-201ENST00000542164 106 ntBASIC3.57□□□□□ -1.84
RNF43Q68DV7 EIF4BP1-201ENST00000554881 351 ntBASIC3.57□□□□□ -1.84
RNF43Q68DV7 MIR7112-201ENST00000616126 65 ntBASIC3.57□□□□□ -1.84
RNF43Q68DV7 U4.6-201ENST00000621618 127 ntBASIC3.57□□□□□ -1.84
RNF43Q68DV7 AC006386.2-201ENST00000624491 75 ntBASIC3.57□□□□□ -1.84
RNF43Q68DV7 AC012005.1-201ENST00000624575 75 ntBASIC3.57□□□□□ -1.84
RNF43Q68DV7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms