Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 FAM35CP-201ENST00000554755 2470 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 SNORD115-35-201ENST00000365122 82 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 U8.17-201ENST00000391292 132 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 RNA5SP104-201ENST00000410989 118 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-57P-201ENST00000411348 103 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 HMGN2P16-201ENST00000456802 261 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 RNU2-11P-201ENST00000459191 187 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 RNU7-164P-201ENST00000459221 62 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-928P-201ENST00000516876 104 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 RN7SKP289-201ENST00000517244 295 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 AC068657.1-201ENST00000520807 306 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 AC002546.1-201ENST00000588041 2504 ntBASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.69□□□□□ -1.82
RNFT1Q5M7Z0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-50P-201ENST00000362356 103 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 RNU1-22P-201ENST00000363334 158 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 Y_RNA.242-201ENST00000364473 110 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 RNA5SP171-201ENST00000391071 115 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 MRPL35P3-201ENST00000421557 364 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 SNRPGP13-201ENST00000442212 177 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 AC084357.1-201ENST00000473404 255 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 RPS27P22-201ENST00000478056 241 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 RNU7-123P-201ENST00000515911 60 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 Y_RNA.666-201ENST00000516187 112 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-795P-201ENST00000516323 103 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 AC004486.1-201ENST00000546846 233 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.68□□□□□ -1.82
RNFT1Q5M7Z0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 RNU1-15P-201ENST00000353977 144 ntBASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 Y_RNA.507-201ENST00000384500 99 ntBASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-267P-201ENST00000516714 103 ntBASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 MIR5685-201ENST00000579080 79 ntBASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 MIR4444-1-201ENST00000581696 74 ntBASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 MIR4444-2-201ENST00000584390 74 ntBASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 AC008739.2-201ENST00000597006 317 ntBASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 AP003122.5-201ENST00000527668 3766 ntBASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RNFT1Q5M7Z0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-832P-201ENST00000363319 107 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 Y_RNA.410-201ENST00000383992 113 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-418P-201ENST00000384035 107 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 RNU1-57P-201ENST00000384491 166 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 MIR518F-201ENST00000384973 87 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 MIR93-201ENST00000385024 80 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 RNA5SP129-201ENST00000410276 118 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 BTF3P4-201ENST00000418852 495 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 AC004552.1-201ENST00000419089 348 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 SNRPGP10-201ENST00000432323 225 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 RPS26P3-201ENST00000470205 348 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 AC090543.2-201ENST00000483963 348 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 AC004057.1-201ENST00000485827 348 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 RNU7-143P-201ENST00000516781 65 ntBASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.66□□□□□ -1.82
RNFT1Q5M7Z0 AC022523.2-201ENST00000561045 150 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms