Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RN7SL297P-201ENST00000483161 293 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 RNU6-965P-201ENST00000516721 96 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 FO624990.1-201ENST00000636373 85 ntBASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SLC44A4Q53GD3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 RNU1-35P-201ENST00000362782 153 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 Y_RNA.117-201ENST00000363294 101 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 RNU1-23P-201ENST00000363361 144 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 SNORA25.6-201ENST00000364121 118 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 RNU6-280P-201ENST00000364145 104 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 MIR512-1-201ENST00000384913 84 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 MIR504-201ENST00000385065 83 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 CKS1BP2-201ENST00000497342 240 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 SNORA25.14-201ENST00000516481 132 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 MIR5739-201ENST00000619803 80 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 Z82195.2-201ENST00000612348 18351 ntBASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SLC44A4Q53GD3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
SLC44A4Q53GD3 BX322639.1-202ENST00000423987 2213 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 AL355596.1-201ENST00000565399 3996 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 SNORD63-201ENST00000384262 68 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 SNORD58.1-201ENST00000391313 66 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 AC092427.1-202ENST00000430569 476 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 AC005002.2-201ENST00000438228 269 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 RPS23P5-201ENST00000495419 428 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 SERF1AP1-201ENST00000514575 187 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 RNA5SP54-201ENST00000516951 92 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 RNU6-182P-201ENST00000516970 105 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 SNORA81.3-201ENST00000517283 198 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 RRN3P3-201ENST00000549207 578 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 MIR4446-201ENST00000578505 67 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 AL512605.2-201ENST00000592972 256 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 BX284668.6-201ENST00000606899 438 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 AC098479.1-201ENST00000609225 154 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 AC135776.4-201ENST00000624300 1904 ntBASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SLC44A4Q53GD3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 RNU6-727P-201ENST00000363592 107 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 RNU6-961P-201ENST00000363893 105 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 Y_RNA.297-201ENST00000364950 91 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 RNU6-290P-201ENST00000365212 101 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 RNU6-1062P-201ENST00000383908 107 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 Y_RNA.785-201ENST00000384290 109 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 MIR329-1-201ENST00000385028 80 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 SNORA3.2-201ENST00000408221 125 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 AC009963.1-201ENST00000417265 157 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 AC112220.1-201ENST00000434628 355 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 AL161788.1-201ENST00000441805 169 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 AC004386.2-201ENST00000441858 148 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 RPL26P26-201ENST00000480251 434 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 RNU4-71P-201ENST00000516258 113 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 RN7SKP49-201ENST00000516675 260 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 RNU6-1198P-201ENST00000516904 67 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 AL049779.4-201ENST00000604500 156 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 AC005562.2-201ENST00000618264 111 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 CTSLP2-204ENST00000629029 392 ntBASIC2.76□□□□□ -1.97
SLC44A4Q53GD3 ZNF658B-202ENST00000615961 3375 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 RNU4-90P-201ENST00000362773 141 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 Y_RNA.76-201ENST00000362931 109 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 RNU6-626P-201ENST00000363354 107 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 Y_RNA.150-201ENST00000363562 102 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 RNU6-137P-201ENST00000363680 108 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 RNU6-20P-201ENST00000384106 107 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 AC104389.3-201ENST00000445629 235 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 snoU13.15-201ENST00000459407 104 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 AC003982.1-202ENST00000469928 248 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 AC091179.3-201ENST00000474761 144 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 RN7SKP40-201ENST00000517211 242 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 MIR4524B-201ENST00000581569 115 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 MIR5006-201ENST00000583027 110 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 MZT1P2-201ENST00000604387 248 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 AC004792.1-201ENST00000614523 137 ntBASIC2.75□□□□□ -1.97
SLC44A4Q53GD3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 265 ms