Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ATP13A4Q4VNC1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATP13A4Q4VNC1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 MIR335-201ENST00000362173 94 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 Y_RNA.14-201ENST00000362415 103 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 Y_RNA.188-201ENST00000363952 111 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 Y_RNA.307-201ENST00000365022 117 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 SNORD88.1-201ENST00000408684 91 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 RNU6-1199P-201ENST00000411249 104 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 RPL23AP3-201ENST00000453844 468 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 RNU6-948P-201ENST00000516374 107 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 EIF4BP1-201ENST00000554881 351 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 AC025754.2-201ENST00000606491 432 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 snoZ196.1-201ENST00000625269 89 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 MTND5P6-201ENST00000422338 1798 ntBASIC2.87□□□□□ -1.95
ATP13A4Q4VNC1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 AC009487.4-201ENST00000624969 3585 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 Y_RNA.350-201ENST00000365409 98 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 SNORA53-201ENST00000391141 249 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 AC123900.1-201ENST00000420390 96 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 POLR2KP2-201ENST00000438155 177 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 AL135938.1-201ENST00000443141 297 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 AC016717.1-201ENST00000448918 286 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 MIR3671-201ENST00000580455 88 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 MIR3605-201ENST00000583214 100 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 SDR42E1P4-201ENST00000620894 481 ntBASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
ATP13A4Q4VNC1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 Y_RNA.383-201ENST00000383855 97 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 RNU6-418P-201ENST00000384035 107 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 Y_RNA.562-201ENST00000384695 113 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 Y_RNA.569-201ENST00000384749 103 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 RNU6-443P-201ENST00000384780 107 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 MIR634-201ENST00000385208 97 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 AC139712.2-201ENST00000424302 339 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 RPL39P38-201ENST00000467018 153 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 RN7SL297P-201ENST00000483161 293 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 SNORA9.3-201ENST00000516383 129 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 RNU2-34P-201ENST00000516534 121 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 RNU6-1271P-201ENST00000517049 105 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 AC012433.1-201ENST00000588916 398 ntBASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
ATP13A4Q4VNC1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 MIR26A1-201ENST00000362205 77 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 Y_RNA.447-201ENST00000384184 113 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 RNA5SP344-201ENST00000411081 104 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 RNU6-57P-201ENST00000411348 103 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 SRIP3-201ENST00000413200 219 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 AL139281.1-201ENST00000422120 335 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 AC107083.1-201ENST00000439643 279 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 PRELID3BP1-201ENST00000457142 540 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 RNU6-498P-201ENST00000459468 107 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 RNU6-221P-201ENST00000459541 99 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 SERF1AP1-201ENST00000514575 187 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 RNU2-31P-201ENST00000516954 155 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 SCARNA24.2-201ENST00000516968 130 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 AC037487.3-201ENST00000606668 112 ntBASIC2.84□□□□□ -1.95
ATP13A4Q4VNC1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
ATP13A4Q4VNC1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.84□□□□□ -1.96
ATP13A4Q4VNC1 RNU6-326P-201ENST00000365480 107 ntBASIC2.83□□□□□ -1.96
ATP13A4Q4VNC1 SNORD14D-201ENST00000384390 87 ntBASIC2.83□□□□□ -1.96
ATP13A4Q4VNC1 MTCO1P44-201ENST00000441935 243 ntBASIC2.83□□□□□ -1.96
ATP13A4Q4VNC1 AC010531.2-201ENST00000465012 153 ntBASIC2.83□□□□□ -1.96
ATP13A4Q4VNC1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.83□□□□□ -1.96
ATP13A4Q4VNC1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.83□□□□□ -1.96
ATP13A4Q4VNC1 MIR3684-201ENST00000579779 74 ntBASIC2.83□□□□□ -1.96
ATP13A4Q4VNC1 LARP7P3-201ENST00000579888 337 ntBASIC2.83□□□□□ -1.96
ATP13A4Q4VNC1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.83□□□□□ -1.96
ATP13A4Q4VNC1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ATP13A4Q4VNC1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.82□□□□□ -1.96
ATP13A4Q4VNC1 Y_RNA.136-201ENST00000363444 102 ntBASIC2.82□□□□□ -1.96
ATP13A4Q4VNC1 SNORD115-30-201ENST00000364117 82 ntBASIC2.82□□□□□ -1.96
ATP13A4Q4VNC1 Y_RNA.243-201ENST00000364481 109 ntBASIC2.82□□□□□ -1.96
ATP13A4Q4VNC1 AL138827.1-201ENST00000402666 306 ntBASIC2.82□□□□□ -1.96
ATP13A4Q4VNC1 U3.40-201ENST00000408706 208 ntBASIC2.82□□□□□ -1.96
ATP13A4Q4VNC1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.82□□□□□ -1.96
ATP13A4Q4VNC1 AL357134.1-201ENST00000445848 426 ntBASIC2.82□□□□□ -1.96
ATP13A4Q4VNC1 MTND4LP30-201ENST00000454092 297 ntBASIC2.82□□□□□ -1.96
ATP13A4Q4VNC1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms