Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 MIR186-201ENST00000384988 86 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 MIR10B-201ENST00000385011 110 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 SNORD12B-201ENST00000410433 91 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 AL445305.1-201ENST00000432577 575 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS72Q15906 MTND5P15-201ENST00000434246 349 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS72Q15906 RPL39P29-201ENST00000447779 157 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 snoU13.6-201ENST00000458785 104 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 RPS23P5-201ENST00000495419 428 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 AC108729.3-201ENST00000513484 108 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 RNU6-496P-201ENST00000516145 99 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 SCARNA24.2-201ENST00000516968 130 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 AC007536.1-201ENST00000533382 349 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS72Q15906 MIR5695-201ENST00000579717 85 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 RPL30P11-203ENST00000598995 310 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 AL359198.2-201ENST00000611836 194 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
VPS72Q15906 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
VPS72Q15906 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
VPS72Q15906 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS72Q15906 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS72Q15906 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS72Q15906 RNU6-655P-201ENST00000362858 107 ntBASIC3.14□□□□□ -1.91
VPS72Q15906 RNU2-14P-201ENST00000411053 191 ntBASIC3.14□□□□□ -1.91
VPS72Q15906 AC078809.1-201ENST00000427601 140 ntBASIC3.14□□□□□ -1.91
VPS72Q15906 AC244670.1-201ENST00000436879 112 ntBASIC3.14□□□□□ -1.91
VPS72Q15906 AC090515.1-201ENST00000465295 476 ntBASIC3.14□□□□□ -1.91
VPS72Q15906 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
VPS72Q15906 RNU6-295P-201ENST00000516901 104 ntBASIC3.14□□□□□ -1.91
VPS72Q15906 RNU6-58P-201ENST00000517143 103 ntBASIC3.14□□□□□ -1.91
VPS72Q15906 AL355297.2-201ENST00000604792 129 ntBASIC3.14□□□□□ -1.91
VPS72Q15906 AL138963.2-201ENST00000605137 226 ntBASIC3.14□□□□□ -1.91
VPS72Q15906 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS72Q15906 AC090517.3-201ENST00000625170 141 ntBASIC3.14□□□□□ -1.91
VPS72Q15906 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS72Q15906 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS72Q15906 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS72Q15906 AC092268.1-201ENST00000342691 405 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 Y_RNA.65-201ENST00000362846 100 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 VTRNA1-1-201ENST00000363120 99 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 Y_RNA.277-201ENST00000364754 102 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 RNA5SP125-201ENST00000364843 120 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 RNU6-281P-201ENST00000384212 103 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 SNORD63-201ENST00000384262 68 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 RNU4-70P-201ENST00000384579 139 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 RNU6-1072P-201ENST00000384703 107 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 RNU6-443P-201ENST00000384780 107 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 RNU6-159P-201ENST00000391080 106 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 AC005002.2-201ENST00000438228 269 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 RN7SKP49-201ENST00000516675 260 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 AC021231.3-201ENST00000558497 370 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 MIR4506-201ENST00000584693 77 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 MIR4781-201ENST00000585250 76 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 AC009779.6-201ENST00000603972 165 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VPS72Q15906 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS72Q15906 AC007336.1-201ENST00000576365 3828 ntBASIC3.13□□□□□ -1.91
VPS72Q15906 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
VPS72Q15906 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS72Q15906 RNU6-1266P-201ENST00000362794 105 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 RNU6-1285P-201ENST00000363480 105 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 RNU6-137P-201ENST00000363680 108 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 SNORA80E-201ENST00000384744 137 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 RNU6-1001P-201ENST00000411265 100 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS72Q15906 AP000705.1-201ENST00000454567 350 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 HSPE1P25-201ENST00000455484 251 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 AC130289.1-201ENST00000577321 73 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 MIR5007-201ENST00000583098 95 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 MIR4658-201ENST00000584344 65 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 AL512605.2-201ENST00000592972 256 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.12□□□□□ -1.91
VPS72Q15906 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS72Q15906 RNU4-90P-201ENST00000362773 141 ntBASIC3.11□□□□□ -1.91
VPS72Q15906 Y_RNA.117-201ENST00000363294 101 ntBASIC3.11□□□□□ -1.91
VPS72Q15906 RNU6-290P-201ENST00000365212 101 ntBASIC3.11□□□□□ -1.91
VPS72Q15906 MIR329-1-201ENST00000385028 80 ntBASIC3.11□□□□□ -1.91
VPS72Q15906 SNORD58.1-201ENST00000391313 66 ntBASIC3.11□□□□□ -1.91
VPS72Q15906 AL603908.1-201ENST00000406098 201 ntBASIC3.11□□□□□ -1.91
VPS72Q15906 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
VPS72Q15906 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS72Q15906 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS72Q15906 RNU6-1198P-201ENST00000516904 67 ntBASIC3.11□□□□□ -1.91
VPS72Q15906 BX284668.6-201ENST00000606899 438 ntBASIC3.11□□□□□ -1.91
VPS72Q15906 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.11□□□□□ -1.91
VPS72Q15906 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS72Q15906 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS72Q15906 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS72Q15906 RNU1-17P-201ENST00000363022 152 ntBASIC3.1□□□□□ -1.91
VPS72Q15906 RNU6-529P-201ENST00000363383 104 ntBASIC3.1□□□□□ -1.91
VPS72Q15906 SNORD115-8-201ENST00000363856 82 ntBASIC3.1□□□□□ -1.91
VPS72Q15906 Y_RNA.269-201ENST00000364685 89 ntBASIC3.1□□□□□ -1.91
VPS72Q15906 SNORD115-38-201ENST00000365037 82 ntBASIC3.1□□□□□ -1.91
VPS72Q15906 Y_RNA.462-201ENST00000384268 102 ntBASIC3.1□□□□□ -1.91
VPS72Q15906 SNORA26.3-201ENST00000391119 136 ntBASIC3.1□□□□□ -1.91
VPS72Q15906 RNU4-30P-201ENST00000410245 143 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms