Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 EEF1B2P7-201ENST00000451177 676 ntBASIC2.92□□□□□ -1.94
IRF9Q00978 SUMO1P2-201ENST00000452524 304 ntBASIC2.92□□□□□ -1.94
IRF9Q00978 RN7SL504P-201ENST00000494496 287 ntBASIC2.92□□□□□ -1.94
IRF9Q00978 AC091826.1-201ENST00000514065 313 ntBASIC2.92□□□□□ -1.94
IRF9Q00978 RNA5SP490-201ENST00000517141 136 ntBASIC2.92□□□□□ -1.94
IRF9Q00978 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.92□□□□□ -1.94
IRF9Q00978 AC011921.3-201ENST00000605540 361 ntBASIC2.92□□□□□ -1.94
IRF9Q00978 AC073349.3-201ENST00000617616 186 ntBASIC2.92□□□□□ -1.94
IRF9Q00978 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
IRF9Q00978 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
IRF9Q00978 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
IRF9Q00978 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
IRF9Q00978 RNU6-1272P-201ENST00000362776 107 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
IRF9Q00978 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 RNU6-710P-201ENST00000410424 105 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 RNU6-57P-201ENST00000411348 103 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 BMS1P22-201ENST00000414726 313 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 AC003685.2-201ENST00000422795 395 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 AC006028.1-201ENST00000438379 402 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 HMGN2P18-201ENST00000450680 270 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 Y_RNA.644-201ENST00000459006 113 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 RNU6-221P-201ENST00000459541 99 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 AC008885.1-201ENST00000514930 301 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 Y_RNA.674-201ENST00000516362 113 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.91□□□□□ -1.94
IRF9Q00978 AC009127.3-201ENST00000570531 403 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 MIR3117-201ENST00000584034 78 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 AL355297.2-201ENST00000604792 129 ntBASIC2.91□□□□□ -1.94
IRF9Q00978 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
IRF9Q00978 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
IRF9Q00978 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.91□□□□□ -1.94
IRF9Q00978 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.9□□□□□ -1.94
IRF9Q00978 AC009487.4-201ENST00000624969 3585 ntBASIC2.9□□□□□ -1.94
IRF9Q00978 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
IRF9Q00978 RNU6-743P-201ENST00000364151 106 ntBASIC2.9□□□□□ -1.95
IRF9Q00978 Y_RNA.793-201ENST00000411222 111 ntBASIC2.9□□□□□ -1.95
IRF9Q00978 BTF3P11-201ENST00000426582 477 ntBASIC2.9□□□□□ -1.95
IRF9Q00978 TRIAP1P1-201ENST00000427062 225 ntBASIC2.9□□□□□ -1.95
IRF9Q00978 AC104332.2-201ENST00000429959 156 ntBASIC2.9□□□□□ -1.95
IRF9Q00978 AC016717.1-201ENST00000448918 286 ntBASIC2.9□□□□□ -1.95
IRF9Q00978 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.9□□□□□ -1.95
IRF9Q00978 PRELID3BP1-201ENST00000457142 540 ntBASIC2.9□□□□□ -1.95
IRF9Q00978 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.9□□□□□ -1.95
IRF9Q00978 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.9□□□□□ -1.95
IRF9Q00978 AC024405.2-202ENST00000532731 184 ntBASIC2.9□□□□□ -1.95
IRF9Q00978 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.9□□□□□ -1.95
IRF9Q00978 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.9□□□□□ -1.95
IRF9Q00978 Z83818.1-201ENST00000603584 150 ntBASIC2.9□□□□□ -1.95
IRF9Q00978 AC004792.1-201ENST00000614523 137 ntBASIC2.9□□□□□ -1.95
IRF9Q00978 snoU18.1-201ENST00000629629 71 ntBASIC2.9□□□□□ -1.95
IRF9Q00978 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
IRF9Q00978 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
IRF9Q00978 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
IRF9Q00978 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
IRF9Q00978 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
IRF9Q00978 RNU1-35P-201ENST00000362782 153 ntBASIC2.89□□□□□ -1.95
IRF9Q00978 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
IRF9Q00978 SNORD14D-201ENST00000384390 87 ntBASIC2.89□□□□□ -1.95
IRF9Q00978 RN7SKP220-201ENST00000410611 288 ntBASIC2.89□□□□□ -1.95
IRF9Q00978 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.89□□□□□ -1.95
IRF9Q00978 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.89□□□□□ -1.95
IRF9Q00978 SNORA70.12-201ENST00000516084 153 ntBASIC2.89□□□□□ -1.95
IRF9Q00978 CBX3P4-201ENST00000538909 354 ntBASIC2.89□□□□□ -1.95
IRF9Q00978 PRELID2P1-201ENST00000552837 301 ntBASIC2.89□□□□□ -1.95
IRF9Q00978 AC090616.3-201ENST00000582184 217 ntBASIC2.89□□□□□ -1.95
IRF9Q00978 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.89□□□□□ -1.95
IRF9Q00978 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
IRF9Q00978 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.89□□□□□ -1.95
IRF9Q00978 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
IRF9Q00978 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
IRF9Q00978 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
IRF9Q00978 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
IRF9Q00978 RNA5SP125-201ENST00000364843 120 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 RNU6-211P-201ENST00000384047 107 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 RNU6-1235P-201ENST00000384559 107 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 MIR627-201ENST00000384979 97 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 AL590004.2-201ENST00000404787 371 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 RNU2-48P-201ENST00000410694 191 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 Z92545.1-201ENST00000411782 234 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.88□□□□□ -1.95
IRF9Q00978 RNU6-498P-201ENST00000459468 107 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 RNU6-948P-201ENST00000516374 107 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 RN7SKP40-201ENST00000517211 242 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 MIR5004-201ENST00000579078 107 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.88□□□□□ -1.95
IRF9Q00978 AL008718.3-201ENST00000610217 321 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 FTX_2.1-201ENST00000618816 94 ntBASIC2.88□□□□□ -1.95
IRF9Q00978 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
IRF9Q00978 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.88□□□□□ -1.95
IRF9Q00978 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.87□□□□□ -1.95
IRF9Q00978 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.87□□□□□ -1.95
IRF9Q00978 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
IRF9Q00978 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
IRF9Q00978 RNU6-418P-201ENST00000384035 107 ntBASIC2.87□□□□□ -1.95
IRF9Q00978 MIR561-201ENST00000385216 97 ntBASIC2.87□□□□□ -1.95
IRF9Q00978 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.87□□□□□ -1.95
IRF9Q00978 AL135790.2-201ENST00000437701 267 ntBASIC2.87□□□□□ -1.95
IRF9Q00978 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms