Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNA5SP182-201ENST00000516064 82 ntBASIC2.35□□□□□ -2.03
RHBDL3P58872 GNAI2P1-201ENST00000541815 315 ntBASIC2.35□□□□□ -2.03
RHBDL3P58872 AC093023.1-201ENST00000547375 507 ntBASIC2.35□□□□□ -2.03
RHBDL3P58872 AC005730.3-201ENST00000583067 366 ntBASIC2.35□□□□□ -2.03
RHBDL3P58872 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.35□□□□□ -2.03
RHBDL3P58872 MTND5P35-201ENST00000557537 1720 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 AC010615.1-201ENST00000594254 1764 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 RNU6-661P-201ENST00000362409 107 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 SNORA72.1-201ENST00000363485 129 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 RNU6-727P-201ENST00000363592 107 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 RNU6-1240P-201ENST00000365155 104 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 RNU6-331P-201ENST00000384724 107 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 Y_RNA.595-201ENST00000410403 105 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 AC092423.1-201ENST00000430165 186 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 AL445305.1-201ENST00000432577 575 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.34□□□□□ -2.03
RHBDL3P58872 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.34□□□□□ -2.03
RHBDL3P58872 RNU7-87P-201ENST00000459343 62 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.34□□□□□ -2.03
RHBDL3P58872 RNA5SP481-201ENST00000516814 122 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 RNU6-548P-201ENST00000517083 115 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 MIR2355-201ENST00000517199 87 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.34□□□□□ -2.03
RHBDL3P58872 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.34□□□□□ -2.04
RHBDL3P58872 RNU6-112P-201ENST00000363599 104 ntBASIC2.33□□□□□ -2.04
RHBDL3P58872 Y_RNA.384-201ENST00000383909 102 ntBASIC2.33□□□□□ -2.04
RHBDL3P58872 RNU2-7P-201ENST00000410794 178 ntBASIC2.33□□□□□ -2.04
RHBDL3P58872 FTH1P12-201ENST00000432137 551 ntBASIC2.33□□□□□ -2.04
RHBDL3P58872 AC099677.2-201ENST00000436385 175 ntBASIC2.33□□□□□ -2.04
RHBDL3P58872 MTND4P17-201ENST00000470444 350 ntBASIC2.33□□□□□ -2.04
RHBDL3P58872 HMGN1P13-201ENST00000505795 138 ntBASIC2.33□□□□□ -2.04
RHBDL3P58872 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.33□□□□□ -2.04
RHBDL3P58872 RNU6-559P-201ENST00000516151 98 ntBASIC2.33□□□□□ -2.04
RHBDL3P58872 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.33□□□□□ -2.04
RHBDL3P58872 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.33□□□□□ -2.04
RHBDL3P58872 MIR3198-2-201ENST00000577868 80 ntBASIC2.33□□□□□ -2.04
RHBDL3P58872 MIR338-201ENST00000636369 67 ntBASIC2.33□□□□□ -2.04
RHBDL3P58872 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RHBDL3P58872 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RHBDL3P58872 AC005336.3-201ENST00000623833 2679 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 RNU6-222P-201ENST00000362438 107 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 RNU6-1188P-201ENST00000363795 107 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 RNA5SP160-201ENST00000364866 120 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 Y_RNA.415-201ENST00000384012 112 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 RNU6-1297P-201ENST00000384415 104 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 MIR548B-201ENST00000385247 97 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 SNORA75.6-201ENST00000391318 127 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 MTCYBP4-201ENST00000401524 249 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 AC019129.1-201ENST00000403786 261 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 AL117342.1-201ENST00000404861 406 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 MIR1185-2-201ENST00000408687 86 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.32□□□□□ -2.04
RHBDL3P58872 EIF1P2-201ENST00000428233 350 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 TOMM22P2-201ENST00000430735 237 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 HMGN2P34-201ENST00000437647 269 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 Y_RNA.653-201ENST00000459091 95 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 RPL36AP21-201ENST00000490372 323 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 AC025647.1-201ENST00000517879 253 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 AC024995.1-201ENST00000523014 93 ntBASIC2.32□□□□□ -2.04
RHBDL3P58872 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RHBDL3P58872 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
RHBDL3P58872 SNORD87-201ENST00000364849 89 ntBASIC2.31□□□□□ -2.04
RHBDL3P58872 Y_RNA.387-201ENST00000383918 102 ntBASIC2.31□□□□□ -2.04
RHBDL3P58872 Y_RNA.390-201ENST00000383932 102 ntBASIC2.31□□□□□ -2.04
RHBDL3P58872 Y_RNA.577-201ENST00000384794 101 ntBASIC2.31□□□□□ -2.04
RHBDL3P58872 MIR583-201ENST00000384846 75 ntBASIC2.31□□□□□ -2.04
RHBDL3P58872 SNORA40.18-201ENST00000391200 128 ntBASIC2.31□□□□□ -2.04
RHBDL3P58872 AC003989.2-201ENST00000440224 169 ntBASIC2.31□□□□□ -2.04
RHBDL3P58872 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.31□□□□□ -2.04
RHBDL3P58872 AC010409.1-201ENST00000487382 476 ntBASIC2.31□□□□□ -2.04
RHBDL3P58872 MIR3684-201ENST00000579779 74 ntBASIC2.31□□□□□ -2.04
RHBDL3P58872 AC126177.8-201ENST00000618339 1015 ntBASIC2.31□□□□□ -2.04
RHBDL3P58872 Y_RNA.474-201ENST00000384341 102 ntBASIC2.3□□□□□ -2.04
RHBDL3P58872 MIR625-201ENST00000385047 85 ntBASIC2.3□□□□□ -2.04
RHBDL3P58872 RNA5SP213-201ENST00000391031 106 ntBASIC2.3□□□□□ -2.04
RHBDL3P58872 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.3□□□□□ -2.04
RHBDL3P58872 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.3□□□□□ -2.04
RHBDL3P58872 RNU7-4P-201ENST00000516961 62 ntBASIC2.3□□□□□ -2.04
RHBDL3P58872 SUB1P3-201ENST00000564581 315 ntBASIC2.3□□□□□ -2.04
RHBDL3P58872 AC080078.3-201ENST00000605407 463 ntBASIC2.3□□□□□ -2.04
RHBDL3P58872 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RHBDL3P58872 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RHBDL3P58872 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RHBDL3P58872 RNU6-879P-201ENST00000364328 108 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 MIR30A-201ENST00000385092 71 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RHBDL3P58872 RNU4-14P-201ENST00000410858 122 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 UQCRBP2-201ENST00000447827 297 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 RPL23AP7-203ENST00000449021 469 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 AL021397.1-201ENST00000451806 248 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.29□□□□□ -2.04
RHBDL3P58872 AC025465.3-201ENST00000510570 311 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 AC074133.1-201ENST00000515696 183 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 RNU6-107P-201ENST00000516643 102 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 SNORA31.17-201ENST00000516953 127 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 APOOP3-201ENST00000536787 586 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 AP001094.1-201ENST00000579805 193 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 MZT1P2-201ENST00000604387 248 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms