Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.26□□□□□ -1.89
PMS1P54277 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.26□□□□□ -1.89
PMS1P54277 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.26□□□□□ -1.89
PMS1P54277 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.26□□□□□ -1.89
PMS1P54277 RNA5SP374-201ENST00000362939 125 ntBASIC3.26□□□□□ -1.89
PMS1P54277 Y_RNA.341-201ENST00000365341 102 ntBASIC3.26□□□□□ -1.89
PMS1P54277 Y_RNA.506-201ENST00000384494 102 ntBASIC3.26□□□□□ -1.89
PMS1P54277 SNORA48.7-201ENST00000391302 135 ntBASIC3.26□□□□□ -1.89
PMS1P54277 AL139095.1-201ENST00000404326 391 ntBASIC3.26□□□□□ -1.89
PMS1P54277 U6atac.2-201ENST00000408644 118 ntBASIC3.26□□□□□ -1.89
PMS1P54277 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.26□□□□□ -1.89
PMS1P54277 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.26□□□□□ -1.89
PMS1P54277 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.26□□□□□ -1.89
PMS1P54277 RPL21P129-201ENST00000491732 478 ntBASIC3.26□□□□□ -1.89
PMS1P54277 RNU6-56P-201ENST00000516986 93 ntBASIC3.26□□□□□ -1.89
PMS1P54277 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.26□□□□□ -1.89
PMS1P54277 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.26□□□□□ -1.89
PMS1P54277 Y_RNA.7-201ENST00000362352 102 ntBASIC3.25□□□□□ -1.89
PMS1P54277 RNA5SP72-201ENST00000364442 117 ntBASIC3.25□□□□□ -1.89
PMS1P54277 Y_RNA.361-201ENST00000365515 120 ntBASIC3.25□□□□□ -1.89
PMS1P54277 RNU6-187P-201ENST00000384139 106 ntBASIC3.25□□□□□ -1.89
PMS1P54277 SNORA72.4-201ENST00000384174 132 ntBASIC3.25□□□□□ -1.89
PMS1P54277 MTCO2P33-201ENST00000402100 465 ntBASIC3.25□□□□□ -1.89
PMS1P54277 RNU6-406P-201ENST00000516470 107 ntBASIC3.25□□□□□ -1.89
PMS1P54277 AC069294.1-201ENST00000608397 350 ntBASIC3.25□□□□□ -1.89
PMS1P54277 AC013791.1-201ENST00000616619 62 ntBASIC3.25□□□□□ -1.89
PMS1P54277 AC134026.1-201ENST00000623249 2239 ntBASIC3.25□□□□□ -1.89
PMS1P54277 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PMS1P54277 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PMS1P54277 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.24□□□□□ -1.89
PMS1P54277 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PMS1P54277 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.24□□□□□ -1.89
PMS1P54277 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PMS1P54277 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
PMS1P54277 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PMS1P54277 SNORD31B-201ENST00000364977 69 ntBASIC3.24□□□□□ -1.89
PMS1P54277 Y_RNA.368-201ENST00000365547 113 ntBASIC3.24□□□□□ -1.89
PMS1P54277 Y_RNA.456-201ENST00000384232 111 ntBASIC3.24□□□□□ -1.89
PMS1P54277 RNU6-125P-201ENST00000384505 107 ntBASIC3.24□□□□□ -1.89
PMS1P54277 RNU2-2P-201ENST00000410396 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 RPS20P10-201ENST00000451209 253 ntBASIC3.24□□□□□ -1.89
PMS1P54277 AC090515.1-201ENST00000465295 476 ntBASIC3.24□□□□□ -1.89
PMS1P54277 CKS1BP2-201ENST00000497342 240 ntBASIC3.24□□□□□ -1.89
PMS1P54277 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.24□□□□□ -1.89
PMS1P54277 ATP5EP1-201ENST00000510257 156 ntBASIC3.24□□□□□ -1.89
PMS1P54277 SUMO2P18-201ENST00000518873 252 ntBASIC3.24□□□□□ -1.89
PMS1P54277 AC018630.3-201ENST00000542637 96 ntBASIC3.24□□□□□ -1.89
PMS1P54277 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.24□□□□□ -1.89
PMS1P54277 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PMS1P54277 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.24□□□□□ -1.89
PMS1P54277 RNU2-4P-201ENST00000606190 192 ntBASIC3.24□□□□□ -1.89
PMS1P54277 AC104465.1-201ENST00000611365 139 ntBASIC3.24□□□□□ -1.89
PMS1P54277 U2.15-201ENST00000611544 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PMS1P54277 U2.16-201ENST00000613119 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 U2.12-201ENST00000613778 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 U2.9-201ENST00000615427 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 U2.11-201ENST00000616345 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 U2.2-201ENST00000616535 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 U2.3-201ENST00000617785 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 U2.19-201ENST00000618602 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 RNU2-1-201ENST00000618664 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 U2.6-201ENST00000619225 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 U2.5-201ENST00000619465 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 U2.10-201ENST00000620268 191 ntBASIC3.24□□□□□ -1.89
PMS1P54277 snoZ196.1-201ENST00000625269 89 ntBASIC3.24□□□□□ -1.89
PMS1P54277 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PMS1P54277 Z82209.1-201ENST00000422141 2135 ntBASIC3.23□□□□□ -1.89
PMS1P54277 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PMS1P54277 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.23□□□□□ -1.89
PMS1P54277 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.23□□□□□ -1.89
PMS1P54277 Y_RNA.8-201ENST00000362353 102 ntBASIC3.23□□□□□ -1.89
PMS1P54277 RNU6-899P-201ENST00000363947 107 ntBASIC3.23□□□□□ -1.89
PMS1P54277 RNU6-1048P-201ENST00000364054 107 ntBASIC3.23□□□□□ -1.89
PMS1P54277 Y_RNA.238-201ENST00000364441 102 ntBASIC3.23□□□□□ -1.89
PMS1P54277 Y_RNA.293-201ENST00000364908 93 ntBASIC3.23□□□□□ -1.89
PMS1P54277 RNU6-804P-201ENST00000384286 107 ntBASIC3.23□□□□□ -1.89
PMS1P54277 SNORD14D-201ENST00000384390 87 ntBASIC3.23□□□□□ -1.89
PMS1P54277 AC244505.4-201ENST00000434905 287 ntBASIC3.23□□□□□ -1.89
PMS1P54277 SSXP5-201ENST00000443473 287 ntBASIC3.23□□□□□ -1.89
PMS1P54277 RN7SL807P-201ENST00000470923 297 ntBASIC3.23□□□□□ -1.89
PMS1P54277 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.23□□□□□ -1.89
PMS1P54277 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.23□□□□□ -1.89
PMS1P54277 RNU6-965P-201ENST00000516721 96 ntBASIC3.23□□□□□ -1.89
PMS1P54277 SNORA31.26-201ENST00000517250 137 ntBASIC3.23□□□□□ -1.89
PMS1P54277 AC100767.1-201ENST00000528178 123 ntBASIC3.23□□□□□ -1.89
PMS1P54277 AC025754.2-201ENST00000606491 432 ntBASIC3.23□□□□□ -1.89
PMS1P54277 AC084757.4-201ENST00000616350 526 ntBASIC3.23□□□□□ -1.89
PMS1P54277 MIR5739-201ENST00000619803 80 ntBASIC3.23□□□□□ -1.89
PMS1P54277 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PMS1P54277 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.22□□□□□ -1.89
PMS1P54277 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PMS1P54277 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PMS1P54277 RNU1-35P-201ENST00000362782 153 ntBASIC3.22□□□□□ -1.89
PMS1P54277 Y_RNA.170-201ENST00000363746 110 ntBASIC3.22□□□□□ -1.89
PMS1P54277 SNORA68.1-201ENST00000364537 132 ntBASIC3.22□□□□□ -1.89
PMS1P54277 Y_RNA.310-201ENST00000365063 113 ntBASIC3.22□□□□□ -1.89
PMS1P54277 RNU6-438P-201ENST00000365561 103 ntBASIC3.22□□□□□ -1.89
PMS1P54277 RNU6-975P-201ENST00000384296 105 ntBASIC3.22□□□□□ -1.89
PMS1P54277 MIR181A2-201ENST00000384863 110 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms