Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AP000870.1-201ENST00000472927 406 ntBASIC2.09□□□□□ -2.07
CLK1P49759 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.09□□□□□ -2.07
CLK1P49759 AC090617.3-201ENST00000573670 475 ntBASIC2.09□□□□□ -2.07
CLK1P49759 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.09□□□□□ -2.07
CLK1P49759 MIR3149-201ENST00000584629 83 ntBASIC2.09□□□□□ -2.07
CLK1P49759 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.08
CLK1P49759 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
CLK1P49759 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLK1P49759 Y_RNA.26-201ENST00000362539 101 ntBASIC2.08□□□□□ -2.08
CLK1P49759 Y_RNA.27-201ENST00000362540 103 ntBASIC2.08□□□□□ -2.08
CLK1P49759 Y_RNA.176-201ENST00000363815 109 ntBASIC2.08□□□□□ -2.08
CLK1P49759 SNORA63.7-201ENST00000365579 123 ntBASIC2.08□□□□□ -2.08
CLK1P49759 RNU6-142P-201ENST00000384019 107 ntBASIC2.08□□□□□ -2.08
CLK1P49759 RNY3P4-201ENST00000384428 101 ntBASIC2.08□□□□□ -2.08
CLK1P49759 Y_RNA.526-201ENST00000384572 110 ntBASIC2.08□□□□□ -2.08
CLK1P49759 MIR153-2-201ENST00000385225 87 ntBASIC2.08□□□□□ -2.08
CLK1P49759 MIR628-201ENST00000385229 95 ntBASIC2.08□□□□□ -2.08
CLK1P49759 RNU1-139P-201ENST00000391307 165 ntBASIC2.08□□□□□ -2.08
CLK1P49759 MIR1283-2-201ENST00000408621 87 ntBASIC2.08□□□□□ -2.08
CLK1P49759 EIF1P2-201ENST00000428233 350 ntBASIC2.08□□□□□ -2.08
CLK1P49759 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.08□□□□□ -2.08
CLK1P49759 RPEP5-201ENST00000441137 268 ntBASIC2.08□□□□□ -2.08
CLK1P49759 RNU7-87P-201ENST00000459343 62 ntBASIC2.08□□□□□ -2.08
CLK1P49759 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.08□□□□□ -2.08
CLK1P49759 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.08□□□□□ -2.08
CLK1P49759 AC021231.3-201ENST00000558497 370 ntBASIC2.08□□□□□ -2.08
CLK1P49759 AL390123.1-201ENST00000603216 237 ntBASIC2.08□□□□□ -2.08
CLK1P49759 7SK.7-201ENST00000603504 247 ntBASIC2.08□□□□□ -2.08
CLK1P49759 AC012493.3-201ENST00000604494 112 ntBASIC2.08□□□□□ -2.08
CLK1P49759 AC046143.2-201ENST00000609789 160 ntBASIC2.08□□□□□ -2.08
CLK1P49759 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
CLK1P49759 U6.92-201ENST00000636464 89 ntBASIC2.08□□□□□ -2.08
CLK1P49759 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
CLK1P49759 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLK1P49759 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLK1P49759 RNU1-58P-201ENST00000362413 163 ntBASIC2.07□□□□□ -2.08
CLK1P49759 SNORD115-8-201ENST00000363856 82 ntBASIC2.07□□□□□ -2.08
CLK1P49759 RNU4-50P-201ENST00000364361 141 ntBASIC2.07□□□□□ -2.08
CLK1P49759 SNORD115-38-201ENST00000365037 82 ntBASIC2.07□□□□□ -2.08
CLK1P49759 RNU6-806P-201ENST00000365147 105 ntBASIC2.07□□□□□ -2.08
CLK1P49759 RNU6-318P-201ENST00000384283 103 ntBASIC2.07□□□□□ -2.08
CLK1P49759 RNU6-505P-201ENST00000384427 107 ntBASIC2.07□□□□□ -2.08
CLK1P49759 MIR10B-201ENST00000385011 110 ntBASIC2.07□□□□□ -2.08
CLK1P49759 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CLK1P49759 RNU2-48P-201ENST00000410694 191 ntBASIC2.07□□□□□ -2.08
CLK1P49759 RPS26P42-201ENST00000413485 326 ntBASIC2.07□□□□□ -2.08
CLK1P49759 AL590135.1-201ENST00000422215 156 ntBASIC2.07□□□□□ -2.08
CLK1P49759 BX510359.4-201ENST00000423750 193 ntBASIC2.07□□□□□ -2.08
CLK1P49759 AC019205.3-201ENST00000424573 156 ntBASIC2.07□□□□□ -2.08
CLK1P49759 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.07□□□□□ -2.08
CLK1P49759 AL731563.1-201ENST00000442202 214 ntBASIC2.07□□□□□ -2.08
CLK1P49759 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.07□□□□□ -2.08
CLK1P49759 AC016700.2-201ENST00000446011 156 ntBASIC2.07□□□□□ -2.08
CLK1P49759 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.07□□□□□ -2.08
CLK1P49759 AC067942.3-201ENST00000512025 362 ntBASIC2.07□□□□□ -2.08
CLK1P49759 RNU5F-2P-201ENST00000516066 82 ntBASIC2.07□□□□□ -2.08
CLK1P49759 RNU6-897P-201ENST00000517135 105 ntBASIC2.07□□□□□ -2.08
CLK1P49759 AP005660.1-201ENST00000522972 293 ntBASIC2.07□□□□□ -2.08
CLK1P49759 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.07□□□□□ -2.08
CLK1P49759 MIR3198-2-201ENST00000577868 80 ntBASIC2.07□□□□□ -2.08
CLK1P49759 AC125232.2-201ENST00000592457 143 ntBASIC2.07□□□□□ -2.08
CLK1P49759 U4.1-201ENST00000620349 87 ntBASIC2.07□□□□□ -2.08
CLK1P49759 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLK1P49759 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLK1P49759 RNU6-1301P-201ENST00000362724 104 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RNU1-76P-201ENST00000362903 159 ntBASIC2.06□□□□□ -2.08
CLK1P49759 Y_RNA.105-201ENST00000363182 111 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RNU6-238P-201ENST00000363313 106 ntBASIC2.06□□□□□ -2.08
CLK1P49759 Y_RNA.222-201ENST00000364264 102 ntBASIC2.06□□□□□ -2.08
CLK1P49759 Y_RNA.319-201ENST00000365138 92 ntBASIC2.06□□□□□ -2.08
CLK1P49759 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.06□□□□□ -2.08
CLK1P49759 Y_RNA.458-201ENST00000384240 102 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RNU6-472P-201ENST00000384299 107 ntBASIC2.06□□□□□ -2.08
CLK1P49759 MIR1262-201ENST00000408276 93 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RNU6-121P-201ENST00000410525 99 ntBASIC2.06□□□□□ -2.08
CLK1P49759 AC012306.1-201ENST00000423267 114 ntBASIC2.06□□□□□ -2.08
CLK1P49759 SDAD1P3-201ENST00000427380 333 ntBASIC2.06□□□□□ -2.08
CLK1P49759 CBX3P6-201ENST00000430257 527 ntBASIC2.06□□□□□ -2.08
CLK1P49759 USP9YP16-201ENST00000430287 407 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RPS15AP28-201ENST00000435088 386 ntBASIC2.06□□□□□ -2.08
CLK1P49759 USP9YP23-201ENST00000455085 407 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RNU6-717P-201ENST00000459076 104 ntBASIC2.06□□□□□ -2.08
CLK1P49759 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLK1P49759 AC008834.1-201ENST00000511612 175 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RNU6-1114P-201ENST00000516022 107 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RNU6-397P-201ENST00000516226 104 ntBASIC2.06□□□□□ -2.08
CLK1P49759 Y_RNA.668-201ENST00000516233 93 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RNU6-1012P-201ENST00000516606 109 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
CLK1P49759 RNU6-58P-201ENST00000517143 103 ntBASIC2.06□□□□□ -2.08
CLK1P49759 MIR2355-201ENST00000517199 87 ntBASIC2.06□□□□□ -2.08
CLK1P49759 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.06□□□□□ -2.08
CLK1P49759 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.06□□□□□ -2.08
CLK1P49759 AL161670.1-201ENST00000554348 137 ntBASIC2.06□□□□□ -2.08
CLK1P49759 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.06□□□□□ -2.08
CLK1P49759 AC004817.2-201ENST00000561794 651 ntBASIC2.06□□□□□ -2.08
CLK1P49759 AC010205.1-201ENST00000616668 449 ntBASIC2.06□□□□□ -2.08
CLK1P49759 SNORD98-201ENST00000636377 67 ntBASIC2.06□□□□□ -2.08
CLK1P49759 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms