Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.77□□□□□ -1.97
CTSSP25774 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.77□□□□□ -1.97
CTSSP25774 EIF4BP1-201ENST00000554881 351 ntBASIC2.77□□□□□ -1.97
CTSSP25774 MIR3684-201ENST00000579779 74 ntBASIC2.77□□□□□ -1.97
CTSSP25774 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.77□□□□□ -1.97
CTSSP25774 MIR1248-201ENST00000629190 106 ntBASIC2.77□□□□□ -1.97
CTSSP25774 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.77□□□□□ -1.97
CTSSP25774 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CTSSP25774 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
CTSSP25774 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CTSSP25774 AL365361.1-201ENST00000566942 3481 ntBASIC2.76□□□□□ -1.97
CTSSP25774 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.76□□□□□ -1.97
CTSSP25774 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CTSSP25774 Y_RNA.82-201ENST00000363000 102 ntBASIC2.76□□□□□ -1.97
CTSSP25774 Y_RNA.92-201ENST00000363043 102 ntBASIC2.76□□□□□ -1.97
CTSSP25774 Y_RNA.235-201ENST00000364412 102 ntBASIC2.76□□□□□ -1.97
CTSSP25774 Y_RNA.306-201ENST00000365015 102 ntBASIC2.76□□□□□ -1.97
CTSSP25774 Y_RNA.312-201ENST00000365089 102 ntBASIC2.76□□□□□ -1.97
CTSSP25774 Y_RNA.322-201ENST00000365151 102 ntBASIC2.76□□□□□ -1.97
CTSSP25774 RNU6-438P-201ENST00000365561 103 ntBASIC2.76□□□□□ -1.97
CTSSP25774 RNU6-662P-201ENST00000384253 104 ntBASIC2.76□□□□□ -1.97
CTSSP25774 AL031003.1-201ENST00000404229 172 ntBASIC2.76□□□□□ -1.97
CTSSP25774 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.76□□□□□ -1.97
CTSSP25774 Y_RNA.650-201ENST00000459002 102 ntBASIC2.76□□□□□ -1.97
CTSSP25774 Y_RNA.777-201ENST00000516982 102 ntBASIC2.76□□□□□ -1.97
CTSSP25774 MIR4282-201ENST00000583613 67 ntBASIC2.76□□□□□ -1.97
CTSSP25774 MIR4506-201ENST00000584693 77 ntBASIC2.76□□□□□ -1.97
CTSSP25774 Y_RNA.771-201ENST00000598668 102 ntBASIC2.76□□□□□ -1.97
CTSSP25774 AL355297.2-201ENST00000604792 129 ntBASIC2.76□□□□□ -1.97
CTSSP25774 Y_RNA.789-201ENST00000622480 102 ntBASIC2.76□□□□□ -1.97
CTSSP25774 AC006386.2-201ENST00000624491 75 ntBASIC2.76□□□□□ -1.97
CTSSP25774 AC012005.1-201ENST00000624575 75 ntBASIC2.76□□□□□ -1.97
CTSSP25774 U6.115-201ENST00000636045 103 ntBASIC2.76□□□□□ -1.97
CTSSP25774 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CTSSP25774 Y_RNA.83-201ENST00000363005 113 ntBASIC2.75□□□□□ -1.97
CTSSP25774 RNU1-23P-201ENST00000363361 144 ntBASIC2.75□□□□□ -1.97
CTSSP25774 SNORA38-201ENST00000363946 132 ntBASIC2.75□□□□□ -1.97
CTSSP25774 Y_RNA.199-201ENST00000364014 102 ntBASIC2.75□□□□□ -1.97
CTSSP25774 Y_RNA.274-201ENST00000364714 101 ntBASIC2.75□□□□□ -1.97
CTSSP25774 Y_RNA.297-201ENST00000364950 91 ntBASIC2.75□□□□□ -1.97
CTSSP25774 Y_RNA.785-201ENST00000384290 109 ntBASIC2.75□□□□□ -1.97
CTSSP25774 RNU6-975P-201ENST00000384296 105 ntBASIC2.75□□□□□ -1.97
CTSSP25774 SNORA44-201ENST00000384584 132 ntBASIC2.75□□□□□ -1.97
CTSSP25774 SNORA46-201ENST00000384762 135 ntBASIC2.75□□□□□ -1.97
CTSSP25774 AL139095.1-201ENST00000404326 391 ntBASIC2.75□□□□□ -1.97
CTSSP25774 AL357139.1-201ENST00000407792 426 ntBASIC2.75□□□□□ -1.97
CTSSP25774 AC022018.1-201ENST00000430685 241 ntBASIC2.75□□□□□ -1.97
CTSSP25774 HMGN2P18-201ENST00000450680 270 ntBASIC2.75□□□□□ -1.97
CTSSP25774 AC016925.1-201ENST00000458303 298 ntBASIC2.75□□□□□ -1.97
CTSSP25774 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CTSSP25774 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.75□□□□□ -1.97
CTSSP25774 RNU6-182P-201ENST00000516970 105 ntBASIC2.75□□□□□ -1.97
CTSSP25774 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.75□□□□□ -1.97
CTSSP25774 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.75□□□□□ -1.97
CTSSP25774 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.75□□□□□ -1.97
CTSSP25774 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CTSSP25774 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.75□□□□□ -1.97
CTSSP25774 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.74□□□□□ -1.97
CTSSP25774 Y_RNA.217-201ENST00000364214 105 ntBASIC2.74□□□□□ -1.97
CTSSP25774 Y_RNA.292-201ENST00000364904 97 ntBASIC2.74□□□□□ -1.97
CTSSP25774 RNU6-651P-201ENST00000411040 105 ntBASIC2.74□□□□□ -1.97
CTSSP25774 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSSP25774 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSSP25774 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.74□□□□□ -1.97
CTSSP25774 SUMO1P2-201ENST00000452524 304 ntBASIC2.74□□□□□ -1.97
CTSSP25774 SNORA59A-201ENST00000459326 152 ntBASIC2.74□□□□□ -1.97
CTSSP25774 Y_RNA.641-201ENST00000459414 105 ntBASIC2.74□□□□□ -1.97
CTSSP25774 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.74□□□□□ -1.97
CTSSP25774 RNU6-948P-201ENST00000516374 107 ntBASIC2.74□□□□□ -1.97
CTSSP25774 RNA5SP490-201ENST00000517141 136 ntBASIC2.74□□□□□ -1.97
CTSSP25774 SNORA81.3-201ENST00000517283 198 ntBASIC2.74□□□□□ -1.97
CTSSP25774 AC005828.6-201ENST00000606610 232 ntBASIC2.74□□□□□ -1.97
CTSSP25774 snoZ196.1-201ENST00000625269 89 ntBASIC2.74□□□□□ -1.97
CTSSP25774 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CTSSP25774 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.73□□□□□ -1.97
CTSSP25774 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CTSSP25774 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.73□□□□□ -1.97
CTSSP25774 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.73□□□□□ -1.97
CTSSP25774 AC009487.4-201ENST00000624969 3585 ntBASIC2.73□□□□□ -1.97
CTSSP25774 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
CTSSP25774 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.73□□□□□ -1.97
CTSSP25774 MIR22-201ENST00000362190 85 ntBASIC2.73□□□□□ -1.97
CTSSP25774 Y_RNA.29-201ENST00000362570 113 ntBASIC2.73□□□□□ -1.97
CTSSP25774 RNY4P28-201ENST00000365281 93 ntBASIC2.73□□□□□ -1.97
CTSSP25774 MIR561-201ENST00000385216 97 ntBASIC2.73□□□□□ -1.97
CTSSP25774 RNU6-710P-201ENST00000410424 105 ntBASIC2.73□□□□□ -1.97
CTSSP25774 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.73□□□□□ -1.97
CTSSP25774 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
CTSSP25774 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.73□□□□□ -1.97
CTSSP25774 AL138752.1-201ENST00000452964 351 ntBASIC2.73□□□□□ -1.97
CTSSP25774 Y_RNA.638-201ENST00000459374 113 ntBASIC2.73□□□□□ -1.97
CTSSP25774 COX6CP14-201ENST00000469580 174 ntBASIC2.73□□□□□ -1.97
CTSSP25774 SNORD116-28-201ENST00000516123 91 ntBASIC2.73□□□□□ -1.97
CTSSP25774 RN7SKP43-201ENST00000516173 320 ntBASIC2.73□□□□□ -1.97
CTSSP25774 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.73□□□□□ -1.97
CTSSP25774 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.73□□□□□ -1.97
CTSSP25774 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.73□□□□□ -1.97
CTSSP25774 AL137790.1-201ENST00000634283 177 ntBASIC2.73□□□□□ -1.97
CTSSP25774 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CTSSP25774 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms