Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.04□□□□□ -2.08
TNFAIP3P21580 CYCSP23-201ENST00000519781 313 ntBASIC2.04□□□□□ -2.08
TNFAIP3P21580 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.04□□□□□ -2.08
TNFAIP3P21580 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.04□□□□□ -2.08
TNFAIP3P21580 AL355375.2-201ENST00000574825 175 ntBASIC2.04□□□□□ -2.08
TNFAIP3P21580 AC009229.3-201ENST00000608056 282 ntBASIC2.04□□□□□ -2.08
TNFAIP3P21580 MIR8074-201ENST00000615081 81 ntBASIC2.04□□□□□ -2.08
TNFAIP3P21580 PISRT1.1-201ENST00000616930 107 ntBASIC2.04□□□□□ -2.08
TNFAIP3P21580 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TNFAIP3P21580 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TNFAIP3P21580 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
TNFAIP3P21580 Y_RNA.67-201ENST00000362870 100 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 Y_RNA.384-201ENST00000383909 102 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 RNU1-139P-201ENST00000391307 165 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 RNU2-40P-201ENST00000410833 196 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.03□□□□□ -2.08
TNFAIP3P21580 RPL36AP21-201ENST00000490372 323 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 RNU6-1114P-201ENST00000516022 107 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 Y_RNA.675-201ENST00000516389 149 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 RNU1-117P-201ENST00000517041 158 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 AC024995.1-201ENST00000523014 93 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 AC093027.1-201ENST00000546698 429 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 HSBP1P1-201ENST00000555205 166 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 FRG2DP-202ENST00000566967 323 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.03□□□□□ -2.08
TNFAIP3P21580 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.03□□□□□ -2.08
TNFAIP3P21580 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.03□□□□□ -2.08
TNFAIP3P21580 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
TNFAIP3P21580 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TNFAIP3P21580 Y_RNA.58-201ENST00000362807 102 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 RNU4-73P-201ENST00000363164 141 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 Y_RNA.154-201ENST00000363624 102 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 Y_RNA.179-201ENST00000363844 90 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 SNORA63D-201ENST00000364359 132 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 RNY3P1-201ENST00000365085 102 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 RNY3-201ENST00000365484 102 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 Y_RNA.387-201ENST00000383918 102 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 RNU6-700P-201ENST00000391043 107 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 SNORA75.4-201ENST00000391278 119 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 MIR1253-201ENST00000408273 105 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 RNU6-57P-201ENST00000411348 103 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 HMGB3P17-201ENST00000504195 649 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 MTND3P22-201ENST00000510932 243 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 RAB11AP2-201ENST00000545905 639 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 AC084364.2-201ENST00000546924 395 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 MIR5701-3-201ENST00000578890 82 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.02□□□□□ -2.09
TNFAIP3P21580 MIR4448-201ENST00000584360 86 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 MIR5701-1-201ENST00000585138 82 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 MIR5701-2-201ENST00000615634 82 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 AC098657.3-201ENST00000620434 263 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 MTND4LP32-201ENST00000636111 270 ntBASIC2.02□□□□□ -2.09
TNFAIP3P21580 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TNFAIP3P21580 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.02□□□□□ -2.09
TNFAIP3P21580 WWP1P1-201ENST00000466609 2769 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 SNORD114-1-201ENST00000362705 72 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 RNU6-414P-201ENST00000363705 104 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 RNU6-1240P-201ENST00000365155 104 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 RNU6-331P-201ENST00000384724 107 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 MT-TD-201ENST00000387419 68 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 MIR1289-2-201ENST00000408360 111 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 RNA5SP504-201ENST00000410676 117 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 RNU2-7P-201ENST00000410794 178 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 MTCYBP10-201ENST00000424905 650 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 AC245047.4-201ENST00000433189 144 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 RPL23AP50-201ENST00000434149 455 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 AL121890.1-201ENST00000435457 205 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.01□□□□□ -2.09
TNFAIP3P21580 AP000870.1-201ENST00000472927 406 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 UBL5P3-201ENST00000475112 231 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TNFAIP3P21580 AC025647.1-201ENST00000517879 253 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 CBX3P8-201ENST00000532412 525 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 APOOP3-201ENST00000536787 586 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 MIR4795-201ENST00000584182 89 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 LARP7P1-201ENST00000605576 316 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 AC010999.1-201ENST00000611856 324 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 AC126177.8-201ENST00000618339 1015 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.01□□□□□ -2.09
TNFAIP3P21580 AL669831.3-213ENST00000636676 183 ntBASIC2.01□□□□□ -2.09
TNFAIP3P21580 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.01□□□□□ -2.09
TNFAIP3P21580 Y_RNA.259-201ENST00000364619 101 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 Y_RNA.404-201ENST00000383978 102 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 RNU6-1297P-201ENST00000384415 104 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 MIR10B-201ENST00000385011 110 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
TNFAIP3P21580 USP9YP16-201ENST00000430287 407 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 USP9YP23-201ENST00000455085 407 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 RPL30P15-201ENST00000457129 321 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 Y_RNA.632-201ENST00000459189 102 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 snoU13.15-201ENST00000459407 104 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 FGF7P4-201ENST00000509595 295 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2□□□□□ -2.09
TNFAIP3P21580 AC090617.3-201ENST00000573670 475 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 AL355802.3-201ENST00000607571 545 ntBASIC2□□□□□ -2.09
TNFAIP3P21580 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2□□□□□ -2.09
TNFAIP3P21580 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TNFAIP3P21580 SNORA16.1-201ENST00000364597 132 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms