Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC127459.3-201ENST00000624328 466 ntBASIC3.58□□□□□ -1.84
ERCC3P19447 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
ERCC3P19447 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.58□□□□□ -1.84
ERCC3P19447 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
ERCC3P19447 Y_RNA.478-201ENST00000384358 107 ntBASIC3.57□□□□□ -1.84
ERCC3P19447 MIR592-201ENST00000384959 97 ntBASIC3.57□□□□□ -1.84
ERCC3P19447 MTCO1P5-201ENST00000433573 344 ntBASIC3.57□□□□□ -1.84
ERCC3P19447 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.57□□□□□ -1.84
ERCC3P19447 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.57□□□□□ -1.84
ERCC3P19447 AC104027.1-201ENST00000521887 300 ntBASIC3.57□□□□□ -1.84
ERCC3P19447 AC006023.1-201ENST00000603944 259 ntBASIC3.57□□□□□ -1.84
ERCC3P19447 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ERCC3P19447 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ERCC3P19447 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.57□□□□□ -1.84
ERCC3P19447 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
ERCC3P19447 SNORD56.3-201ENST00000363507 71 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 Y_RNA.418-201ENST00000384029 102 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 Y_RNA.552-201ENST00000384665 112 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 AL031003.1-201ENST00000404229 172 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 AC139712.2-201ENST00000424302 339 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 RNU1-143P-201ENST00000516296 146 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 MIR4672-201ENST00000583126 81 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 U1.23-201ENST00000610293 146 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 RNU1-68P-201ENST00000615382 146 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 U2.14-201ENST00000615943 113 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 U1.39-201ENST00000621562 146 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 U6.115-201ENST00000636045 103 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.56□□□□□ -1.84
ERCC3P19447 AP006437.1-201ENST00000641440 3685 ntBASIC3.56□□□□□ -1.84
ERCC3P19447 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ERCC3P19447 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
ERCC3P19447 Y_RNA.515-201ENST00000384535 112 ntBASIC3.55□□□□□ -1.84
ERCC3P19447 SNORD67-201ENST00000390833 111 ntBASIC3.55□□□□□ -1.84
ERCC3P19447 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.55□□□□□ -1.84
ERCC3P19447 AC108059.2-201ENST00000434626 151 ntBASIC3.55□□□□□ -1.84
ERCC3P19447 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.55□□□□□ -1.84
ERCC3P19447 AC091959.1-201ENST00000495857 238 ntBASIC3.55□□□□□ -1.84
ERCC3P19447 RNU6-436P-201ENST00000516171 114 ntBASIC3.55□□□□□ -1.84
ERCC3P19447 Y_RNA.679-201ENST00000516416 91 ntBASIC3.55□□□□□ -1.84
ERCC3P19447 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.55□□□□□ -1.84
ERCC3P19447 MIR3668-201ENST00000582138 75 ntBASIC3.55□□□□□ -1.84
ERCC3P19447 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ERCC3P19447 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ERCC3P19447 MIR22-201ENST00000362190 85 ntBASIC3.54□□□□□ -1.84
ERCC3P19447 SNORD115-3-201ENST00000363100 82 ntBASIC3.54□□□□□ -1.84
ERCC3P19447 Y_RNA.518-201ENST00000384552 113 ntBASIC3.54□□□□□ -1.84
ERCC3P19447 RNU6-847P-201ENST00000411115 108 ntBASIC3.54□□□□□ -1.84
ERCC3P19447 EEF1A1P41-201ENST00000414667 207 ntBASIC3.54□□□□□ -1.84
ERCC3P19447 BMS1P22-201ENST00000414726 313 ntBASIC3.54□□□□□ -1.84
ERCC3P19447 AC123900.1-201ENST00000420390 96 ntBASIC3.54□□□□□ -1.84
ERCC3P19447 PRELID3BP1-201ENST00000457142 540 ntBASIC3.54□□□□□ -1.84
ERCC3P19447 AC018868.1-201ENST00000491307 315 ntBASIC3.54□□□□□ -1.84
ERCC3P19447 RNU6-111P-201ENST00000517179 105 ntBASIC3.54□□□□□ -1.84
ERCC3P19447 RPL12P50-201ENST00000603116 116 ntBASIC3.54□□□□□ -1.84
ERCC3P19447 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ERCC3P19447 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.53□□□□□ -1.84
ERCC3P19447 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ERCC3P19447 RNU6-338P-201ENST00000383888 105 ntBASIC3.53□□□□□ -1.84
ERCC3P19447 RPL21P3-201ENST00000395517 478 ntBASIC3.53□□□□□ -1.84
ERCC3P19447 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.53□□□□□ -1.84
ERCC3P19447 RNU2-48P-201ENST00000410694 191 ntBASIC3.53□□□□□ -1.84
ERCC3P19447 RN7SKP58-201ENST00000411010 305 ntBASIC3.53□□□□□ -1.84
ERCC3P19447 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.53□□□□□ -1.84
ERCC3P19447 AC022018.1-201ENST00000430685 241 ntBASIC3.53□□□□□ -1.84
ERCC3P19447 AL139132.1-201ENST00000431587 344 ntBASIC3.53□□□□□ -1.84
ERCC3P19447 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.53□□□□□ -1.84
ERCC3P19447 AC010531.2-201ENST00000465012 153 ntBASIC3.53□□□□□ -1.84
ERCC3P19447 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.53□□□□□ -1.84
ERCC3P19447 BX284668.6-201ENST00000606899 438 ntBASIC3.53□□□□□ -1.84
ERCC3P19447 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.53□□□□□ -1.84
ERCC3P19447 U4atac.1-201ENST00000618345 95 ntBASIC3.53□□□□□ -1.84
ERCC3P19447 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.53□□□□□ -1.84
ERCC3P19447 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.53□□□□□ -1.84
ERCC3P19447 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ERCC3P19447 SNORD115-30-201ENST00000364117 82 ntBASIC3.52□□□□□ -1.85
ERCC3P19447 RNU6-407P-201ENST00000365280 104 ntBASIC3.52□□□□□ -1.85
ERCC3P19447 RNU6-662P-201ENST00000384253 104 ntBASIC3.52□□□□□ -1.85
ERCC3P19447 RNU6-1235P-201ENST00000384559 107 ntBASIC3.52□□□□□ -1.85
ERCC3P19447 MIR1253-201ENST00000408273 105 ntBASIC3.52□□□□□ -1.85
ERCC3P19447 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.52□□□□□ -1.85
ERCC3P19447 RNU6-498P-201ENST00000459468 107 ntBASIC3.52□□□□□ -1.85
ERCC3P19447 RNU6-221P-201ENST00000459541 99 ntBASIC3.52□□□□□ -1.85
ERCC3P19447 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
ERCC3P19447 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.51□□□□□ -1.85
ERCC3P19447 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
ERCC3P19447 Y_RNA.257-201ENST00000364596 102 ntBASIC3.51□□□□□ -1.85
ERCC3P19447 RNU6-740P-201ENST00000364734 105 ntBASIC3.51□□□□□ -1.85
ERCC3P19447 RNU6-1248P-201ENST00000391096 64 ntBASIC3.51□□□□□ -1.85
ERCC3P19447 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.51□□□□□ -1.85
ERCC3P19447 Y_RNA.590-201ENST00000410140 107 ntBASIC3.51□□□□□ -1.85
ERCC3P19447 AC008134.1-201ENST00000420943 193 ntBASIC3.51□□□□□ -1.85
ERCC3P19447 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.51□□□□□ -1.85
ERCC3P19447 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.51□□□□□ -1.85
ERCC3P19447 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ERCC3P19447 Y_RNA.20-201ENST00000362479 113 ntBASIC3.5□□□□□ -1.85
ERCC3P19447 Y_RNA.117-201ENST00000363294 101 ntBASIC3.5□□□□□ -1.85
ERCC3P19447 Y_RNA.136-201ENST00000363444 102 ntBASIC3.5□□□□□ -1.85
ERCC3P19447 Y_RNA.243-201ENST00000364481 109 ntBASIC3.5□□□□□ -1.85
ERCC3P19447 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms