Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL136363.2-201ENST00000604173 851 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AC008536.2-201ENST00000607284 349 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AC105081.1-201ENST00000617727 106 ntBASIC-0.74□□□□□ -2.53
APOBP04114 AC103705.1-201ENST00000619013 241 ntBASIC-0.74□□□□□ -2.53
APOBP04114 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.75□□□□□ -2.53
APOBP04114 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.75□□□□□ -2.53
APOBP04114 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.75□□□□□ -2.53
APOBP04114 AL117339.3-201ENST00000418733 162 ntBASIC-0.75□□□□□ -2.53
APOBP04114 AL590135.1-201ENST00000422215 156 ntBASIC-0.75□□□□□ -2.53
APOBP04114 AC019205.3-201ENST00000424573 156 ntBASIC-0.75□□□□□ -2.53
APOBP04114 AC016700.2-201ENST00000446011 156 ntBASIC-0.75□□□□□ -2.53
APOBP04114 AL360271.2-201ENST00000447710 161 ntBASIC-0.75□□□□□ -2.53
APOBP04114 AC015911.1-201ENST00000495111 156 ntBASIC-0.75□□□□□ -2.53
APOBP04114 RNU6-428P-201ENST00000362942 107 ntBASIC-0.75□□□□□ -2.53
APOBP04114 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.75□□□□□ -2.53
APOBP04114 AL353752.1-201ENST00000454946 260 ntBASIC-0.75□□□□□ -2.53
APOBP04114 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.75□□□□□ -2.53
APOBP04114 MTND2P7-201ENST00000521337 640 ntBASIC-0.75□□□□□ -2.53
APOBP04114 AC090897.1-201ENST00000580909 226 ntBASIC-0.75□□□□□ -2.53
APOBP04114 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.75□□□□□ -2.53
APOBP04114 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.75□□□□□ -2.53
APOBP04114 RNU6-25P-201ENST00000383873 107 ntBASIC-0.75□□□□□ -2.53
APOBP04114 RNU6-29P-201ENST00000384637 107 ntBASIC-0.75□□□□□ -2.53
APOBP04114 RNU6-759P-201ENST00000516740 103 ntBASIC-0.75□□□□□ -2.53
APOBP04114 AL929325.1-201ENST00000603096 117 ntBASIC-0.75□□□□□ -2.53
APOBP04114 AL359075.3-201ENST00000613288 217 ntBASIC-0.75□□□□□ -2.53
APOBP04114 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.75□□□□□ -2.53
APOBP04114 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.76□□□□□ -2.53
APOBP04114 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.76□□□□□ -2.53
APOBP04114 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.76□□□□□ -2.53
APOBP04114 SNORD111.1-201ENST00000516421 86 ntBASIC-0.76□□□□□ -2.53
APOBP04114 AC104820.1-201ENST00000624183 307 ntBASIC-0.76□□□□□ -2.53
APOBP04114 MIR124-2-201ENST00000385081 109 ntBASIC-0.76□□□□□ -2.53
APOBP04114 RNU6-754P-201ENST00000391166 107 ntBASIC-0.76□□□□□ -2.53
APOBP04114 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.76□□□□□ -2.53
APOBP04114 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.76□□□□□ -2.53
APOBP04114 TMEM251P1-201ENST00000503717 318 ntBASIC-0.76□□□□□ -2.53
APOBP04114 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.76□□□□□ -2.53
APOBP04114 AL358072.1-201ENST00000604156 575 ntBASIC-0.76□□□□□ -2.53
APOBP04114 Z99289.3-201ENST00000605586 594 ntBASIC-0.76□□□□□ -2.53
APOBP04114 AC004223.4-201ENST00000612426 332 ntBASIC-0.76□□□□□ -2.53
APOBP04114 SNORA22B-201ENST00000383876 138 ntBASIC-0.76□□□□□ -2.53
APOBP04114 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.76□□□□□ -2.53
APOBP04114 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.76□□□□□ -2.53
APOBP04114 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.76□□□□□ -2.53
APOBP04114 SNORA63C-201ENST00000364578 129 ntBASIC-0.76□□□□□ -2.53
APOBP04114 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.76□□□□□ -2.53
APOBP04114 RNU6-613P-201ENST00000410412 108 ntBASIC-0.76□□□□□ -2.53
APOBP04114 AL663109.1-201ENST00000411498 844 ntBASIC-0.76□□□□□ -2.53
APOBP04114 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.76□□□□□ -2.53
APOBP04114 MTND1P31-201ENST00000449206 961 ntBASIC-0.76□□□□□ -2.53
APOBP04114 MIR18B-201ENST00000454574 71 ntBASIC-0.76□□□□□ -2.53
APOBP04114 CR383656.4-201ENST00000546909 122 ntBASIC-0.76□□□□□ -2.53
APOBP04114 MTND4P9-201ENST00000507819 1346 ntBASIC-0.76□□□□□ -2.53
APOBP04114 SNORA67.2-201ENST00000384300 149 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.77□□□□□ -2.53
APOBP04114 RNU6-878P-201ENST00000384578 110 ntBASIC-0.77□□□□□ -2.53
APOBP04114 SNORD41-201ENST00000386967 70 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.77□□□□□ -2.53
APOBP04114 RNU6-856P-201ENST00000516959 98 ntBASIC-0.77□□□□□ -2.53
APOBP04114 BNIP3P24-201ENST00000593398 557 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AC012507.3-201ENST00000603556 477 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AC006380.1-201ENST00000603598 186 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AL356094.1-201ENST00000624663 1212 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AL139824.2-201ENST00000458731 1095 ntBASIC-0.77□□□□□ -2.53
APOBP04114 RPS23P5-201ENST00000495419 428 ntBASIC-0.77□□□□□ -2.53
APOBP04114 MTND3P5-201ENST00000512798 333 ntBASIC-0.77□□□□□ -2.53
APOBP04114 MIR4742-201ENST00000581069 85 ntBASIC-0.77□□□□□ -2.53
APOBP04114 SNORD39.3-201ENST00000584451 71 ntBASIC-0.77□□□□□ -2.53
APOBP04114 BNIP3P30-201ENST00000601184 574 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AL596327.1-201ENST00000603629 213 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AC084368.1-201ENST00000620935 65 ntBASIC-0.77□□□□□ -2.53
APOBP04114 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.77□□□□□ -2.53
APOBP04114 MIR876-201ENST00000401147 81 ntBASIC-0.77□□□□□ -2.53
APOBP04114 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.77□□□□□ -2.53
APOBP04114 snoU13.8-201ENST00000458890 104 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AL163973.1-201ENST00000484753 577 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AC026421.1-201ENST00000519101 163 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AC104383.1-201ENST00000530297 370 ntBASIC-0.77□□□□□ -2.53
APOBP04114 MIR378D2-201ENST00000580636 98 ntBASIC-0.77□□□□□ -2.53
APOBP04114 MIR4677-201ENST00000584153 80 ntBASIC-0.77□□□□□ -2.53
APOBP04114 AC063944.3-201ENST00000609969 533 ntBASIC-0.77□□□□□ -2.53
APOBP04114 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.78□□□□□ -2.53
APOBP04114 RNA5SP261-201ENST00000410536 106 ntBASIC-0.78□□□□□ -2.53
APOBP04114 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.78□□□□□ -2.53
APOBP04114 AC098679.4-201ENST00000624241 654 ntBASIC-0.78□□□□□ -2.53
APOBP04114 AC092104.1-201ENST00000497346 1441 ntBASIC-0.78□□□□□ -2.53
APOBP04114 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.78□□□□□ -2.53
APOBP04114 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.78□□□□□ -2.53
APOBP04114 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.78□□□□□ -2.53
APOBP04114 AC016831.2-201ENST00000417179 352 ntBASIC-0.78□□□□□ -2.53
APOBP04114 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.78□□□□□ -2.53
APOBP04114 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.78□□□□□ -2.53
APOBP04114 AC100767.1-201ENST00000528178 123 ntBASIC-0.78□□□□□ -2.53
APOBP04114 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.78□□□□□ -2.53
APOBP04114 AL050341.1-201ENST00000447743 313 ntBASIC-0.78□□□□□ -2.53
APOBP04114 SCARNA18B-201ENST00000458806 135 ntBASIC-0.78□□□□□ -2.53
APOBP04114 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.78□□□□□ -2.53
APOBP04114 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.78□□□□□ -2.53
APOBP04114 AC007684.1-201ENST00000609671 477 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms