Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC091925.1-201ENST00000623204 462 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 AC138305.3-201ENST00000624988 240 ntBASIC1.7□□□□□ -2.14
MT-ND1P03886 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
MT-ND1P03886 MIR369-201ENST00000362155 70 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 Y_RNA.111-201ENST00000363248 100 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 RNU6-23P-201ENST00000363283 107 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 Y_RNA.197-201ENST00000364004 102 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 Y_RNA.813-201ENST00000364639 102 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 SNORD31B-201ENST00000364977 69 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 AC009310.1-201ENST00000414414 451 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 AC007098.1-201ENST00000420122 367 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 AC096644.2-201ENST00000429278 159 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 USP9YP16-201ENST00000430287 407 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.69□□□□□ -2.14
MT-ND1P03886 USP9YP23-201ENST00000455085 407 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 AC016925.1-201ENST00000458303 298 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 AC091179.3-201ENST00000474761 144 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 UBE2DNL-203ENST00000474922 222 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.69□□□□□ -2.14
MT-ND1P03886 RNU6-1114P-201ENST00000516022 107 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 RNU6-1198P-201ENST00000516904 67 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 RRN3P3-201ENST00000549207 578 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.69□□□□□ -2.14
MT-ND1P03886 AC090617.3-201ENST00000573670 475 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 MZT1P2-201ENST00000604387 248 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 RPL17P51-201ENST00000605218 238 ntBASIC1.69□□□□□ -2.14
MT-ND1P03886 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
MT-ND1P03886 RNA5SP361-201ENST00000362686 118 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 RNU6-727P-201ENST00000363592 107 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 RNU6-245P-201ENST00000384020 107 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 RNU6-318P-201ENST00000384283 103 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 RNU6-1001P-201ENST00000411265 100 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 AC123900.1-201ENST00000420390 96 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 AC010095.1-201ENST00000443543 144 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.68□□□□□ -2.14
MT-ND1P03886 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.68□□□□□ -2.14
MT-ND1P03886 RNU7-169P-201ENST00000459456 61 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MT-ND1P03886 AC107393.1-201ENST00000512403 346 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 AC087441.2-201ENST00000529141 262 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 uc_338.22-201ENST00000622722 187 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 AL160413.1-201ENST00000622780 310 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MT-ND1P03886 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.68□□□□□ -2.14
MT-ND1P03886 ZNF72P-201ENST00000425869 1908 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 AC073544.1-201ENST00000600110 1595 ntBASIC1.68□□□□□ -2.14
MT-ND1P03886 Y_RNA.31-201ENST00000362574 102 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 Y_RNA.138-201ENST00000363462 102 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 SNORD87-201ENST00000364849 89 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 Y_RNA.314-201ENST00000365114 102 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 Y_RNA.395-201ENST00000383945 109 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 RNU6-418P-201ENST00000384035 107 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 RNU6-474P-201ENST00000384243 107 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 MIR329-1-201ENST00000385028 80 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 SNORA48.1-201ENST00000390879 135 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 AC019129.1-201ENST00000403786 261 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 MIR1283-1-201ENST00000408494 87 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 Y_RNA.592-201ENST00000410274 109 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 AC018865.2-201ENST00000423631 129 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 MTCO1P44-201ENST00000441935 243 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 AL137792.2-201ENST00000443484 235 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 AC010531.2-201ENST00000465012 153 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 HMGN2P9-201ENST00000476875 229 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.67□□□□□ -2.14
MT-ND1P03886 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.67□□□□□ -2.14
MT-ND1P03886 RNU6-344P-201ENST00000516635 111 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 RNU1-117P-201ENST00000517041 158 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 AC093023.1-201ENST00000547375 507 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.67□□□□□ -2.14
MT-ND1P03886 AL357075.2-201ENST00000614906 189 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 AC090574.1-201ENST00000623186 233 ntBASIC1.67□□□□□ -2.14
MT-ND1P03886 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
MT-ND1P03886 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
MT-ND1P03886 RNU1-62P-201ENST00000362599 164 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 Y_RNA.80-201ENST00000362996 102 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 RNA5SP493-201ENST00000364115 91 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 RNU6-280P-201ENST00000364145 104 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 Y_RNA.252-201ENST00000364556 101 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 RNU4-42P-201ENST00000364738 142 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 RNU6-438P-201ENST00000365561 103 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 Y_RNA.415-201ENST00000384012 112 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 RNU6-708P-201ENST00000384217 107 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 RNU6-1145P-201ENST00000384246 107 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 Y_RNA.485-201ENST00000384395 102 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 SNORA69.1-201ENST00000390904 137 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 RNU6-308P-201ENST00000390957 107 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.66□□□□□ -2.14
MT-ND1P03886 AC139712.2-201ENST00000424302 339 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 AC016717.1-201ENST00000448918 286 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 Y_RNA.639-201ENST00000458981 102 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 HMGN1P13-201ENST00000505795 138 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 SNORA44.1-201ENST00000517031 108 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 AC022868.1-201ENST00000517767 391 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 MIR4648-201ENST00000580107 72 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.66□□□□□ -2.14
MT-ND1P03886 AC103810.8-201ENST00000607347 118 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.66□□□□□ -2.14
MT-ND1P03886 AC010999.1-201ENST00000611856 324 ntBASIC1.66□□□□□ -2.14
MT-ND1P03886 AL590240.4-201ENST00000616908 390 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms