Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AL445305.1-201ENST00000432577 575 ntBASIC1.86□□□□□ -2.11
BEST1O76090 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.86□□□□□ -2.11
BEST1O76090 PRDX4P1-201ENST00000507189 574 ntBASIC1.86□□□□□ -2.11
BEST1O76090 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
BEST1O76090 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.86□□□□□ -2.11
BEST1O76090 RNU6-250P-201ENST00000516958 103 ntBASIC1.86□□□□□ -2.11
BEST1O76090 AC025647.1-201ENST00000517879 253 ntBASIC1.86□□□□□ -2.11
BEST1O76090 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.86□□□□□ -2.11
BEST1O76090 AC090617.3-201ENST00000573670 475 ntBASIC1.86□□□□□ -2.11
BEST1O76090 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.86□□□□□ -2.11
BEST1O76090 AC010999.1-201ENST00000611856 324 ntBASIC1.86□□□□□ -2.11
BEST1O76090 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.86□□□□□ -2.11
BEST1O76090 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
BEST1O76090 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
BEST1O76090 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
BEST1O76090 RNY1P16-201ENST00000363063 111 ntBASIC1.85□□□□□ -2.11
BEST1O76090 Y_RNA.106-201ENST00000363189 100 ntBASIC1.85□□□□□ -2.11
BEST1O76090 Y_RNA.184-201ENST00000363884 108 ntBASIC1.85□□□□□ -2.11
BEST1O76090 RNU6-1240P-201ENST00000365155 104 ntBASIC1.85□□□□□ -2.11
BEST1O76090 Y_RNA.473-201ENST00000384333 102 ntBASIC1.85□□□□□ -2.11
BEST1O76090 MIR548B-201ENST00000385247 97 ntBASIC1.85□□□□□ -2.11
BEST1O76090 RNU6-360P-201ENST00000390944 104 ntBASIC1.85□□□□□ -2.11
BEST1O76090 RNA5SP213-201ENST00000391031 106 ntBASIC1.85□□□□□ -2.11
BEST1O76090 AL627390.1-201ENST00000396055 340 ntBASIC1.85□□□□□ -2.11
BEST1O76090 MIR1185-2-201ENST00000408687 86 ntBASIC1.85□□□□□ -2.11
BEST1O76090 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.85□□□□□ -2.11
BEST1O76090 FTH1P12-201ENST00000432137 551 ntBASIC1.85□□□□□ -2.11
BEST1O76090 HMGN2P34-201ENST00000437647 269 ntBASIC1.85□□□□□ -2.11
BEST1O76090 MTND3P10-201ENST00000450967 341 ntBASIC1.85□□□□□ -2.11
BEST1O76090 RPL36AP21-201ENST00000490372 323 ntBASIC1.85□□□□□ -2.11
BEST1O76090 AC025465.3-201ENST00000510570 311 ntBASIC1.85□□□□□ -2.11
BEST1O76090 RNA5SP481-201ENST00000516814 122 ntBASIC1.85□□□□□ -2.11
BEST1O76090 CYCSP23-201ENST00000519781 313 ntBASIC1.85□□□□□ -2.11
BEST1O76090 AC105029.1-201ENST00000520250 669 ntBASIC1.85□□□□□ -2.11
BEST1O76090 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.85□□□□□ -2.11
BEST1O76090 DEFB122-202ENST00000569013 197 ntBASIC1.85□□□□□ -2.11
BEST1O76090 MIR5695-201ENST00000579717 85 ntBASIC1.85□□□□□ -2.11
BEST1O76090 MIR4524B-201ENST00000581569 115 ntBASIC1.85□□□□□ -2.11
BEST1O76090 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
BEST1O76090 MIR8074-201ENST00000615081 81 ntBASIC1.85□□□□□ -2.11
BEST1O76090 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.85□□□□□ -2.11
BEST1O76090 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
BEST1O76090 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
BEST1O76090 RNU6-727P-201ENST00000363592 107 ntBASIC1.84□□□□□ -2.11
BEST1O76090 SNORA63D-201ENST00000364359 132 ntBASIC1.84□□□□□ -2.11
BEST1O76090 SNORD87-201ENST00000364849 89 ntBASIC1.84□□□□□ -2.11
BEST1O76090 Y_RNA.364-201ENST00000365532 101 ntBASIC1.84□□□□□ -2.11
BEST1O76090 Y_RNA.415-201ENST00000384012 112 ntBASIC1.84□□□□□ -2.11
BEST1O76090 RNU6-281P-201ENST00000384212 103 ntBASIC1.84□□□□□ -2.11
BEST1O76090 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.84□□□□□ -2.11
BEST1O76090 HMGB3P17-201ENST00000504195 649 ntBASIC1.84□□□□□ -2.11
BEST1O76090 AC103851.1-201ENST00000506833 274 ntBASIC1.84□□□□□ -2.11
BEST1O76090 RNU6-548P-201ENST00000517083 115 ntBASIC1.84□□□□□ -2.11
BEST1O76090 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.84□□□□□ -2.11
BEST1O76090 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.84□□□□□ -2.11
BEST1O76090 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.84□□□□□ -2.12
BEST1O76090 MTND5P16-201ENST00000460269 1703 ntBASIC1.83□□□□□ -2.12
BEST1O76090 RNA5SP99-201ENST00000364020 114 ntBASIC1.83□□□□□ -2.12
BEST1O76090 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
BEST1O76090 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.83□□□□□ -2.12
BEST1O76090 MIR934-201ENST00000401241 83 ntBASIC1.83□□□□□ -2.12
BEST1O76090 PDCL2P1-201ENST00000419302 352 ntBASIC1.83□□□□□ -2.12
BEST1O76090 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.83□□□□□ -2.12
BEST1O76090 Y_RNA.635-201ENST00000459041 101 ntBASIC1.83□□□□□ -2.12
BEST1O76090 RPL7P42-201ENST00000481005 679 ntBASIC1.83□□□□□ -2.12
BEST1O76090 AC108210.2-201ENST00000503681 201 ntBASIC1.83□□□□□ -2.12
BEST1O76090 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.83□□□□□ -2.12
BEST1O76090 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.83□□□□□ -2.12
BEST1O76090 Y_RNA.683-201ENST00000516508 93 ntBASIC1.83□□□□□ -2.12
BEST1O76090 AC024995.1-201ENST00000523014 93 ntBASIC1.83□□□□□ -2.12
BEST1O76090 AL359757.2-201ENST00000624309 274 ntBASIC1.83□□□□□ -2.12
BEST1O76090 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
BEST1O76090 MTND5P35-201ENST00000557537 1720 ntBASIC1.83□□□□□ -2.12
BEST1O76090 RNU1-17P-201ENST00000363022 152 ntBASIC1.82□□□□□ -2.12
BEST1O76090 RNU6-414P-201ENST00000363705 104 ntBASIC1.82□□□□□ -2.12
BEST1O76090 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
BEST1O76090 SNORA75.4-201ENST00000391278 119 ntBASIC1.82□□□□□ -2.12
BEST1O76090 AC016909.1-201ENST00000415916 166 ntBASIC1.82□□□□□ -2.12
BEST1O76090 HSPE1P9-201ENST00000440046 311 ntBASIC1.82□□□□□ -2.12
BEST1O76090 UBE2V1P7-201ENST00000446395 340 ntBASIC1.82□□□□□ -2.12
BEST1O76090 AK6P2-201ENST00000549020 471 ntBASIC1.82□□□□□ -2.12
BEST1O76090 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.82□□□□□ -2.12
BEST1O76090 MZT1P2-201ENST00000604387 248 ntBASIC1.82□□□□□ -2.12
BEST1O76090 TPTEP1-208ENST00000636884 213 ntBASIC1.82□□□□□ -2.12
BEST1O76090 AC099654.14-201ENST00000638599 341 ntBASIC1.82□□□□□ -2.12
BEST1O76090 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
BEST1O76090 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
BEST1O76090 WWP1P1-201ENST00000466609 2769 ntBASIC1.81□□□□□ -2.12
BEST1O76090 Y_RNA.287-201ENST00000364853 94 ntBASIC1.81□□□□□ -2.12
BEST1O76090 SNORD81.2-201ENST00000365153 76 ntBASIC1.81□□□□□ -2.12
BEST1O76090 Y_RNA.404-201ENST00000383978 102 ntBASIC1.81□□□□□ -2.12
BEST1O76090 RNU6-417P-201ENST00000384712 107 ntBASIC1.81□□□□□ -2.12
BEST1O76090 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.81□□□□□ -2.12
BEST1O76090 EIF1P2-201ENST00000428233 350 ntBASIC1.81□□□□□ -2.12
BEST1O76090 HSPE1P21-201ENST00000438283 308 ntBASIC1.81□□□□□ -2.12
BEST1O76090 RBMX2P4-201ENST00000441256 376 ntBASIC1.81□□□□□ -2.12
BEST1O76090 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.81□□□□□ -2.12
BEST1O76090 AC027575.1-201ENST00000481064 460 ntBASIC1.81□□□□□ -2.12
BEST1O76090 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.81□□□□□ -2.12
BEST1O76090 RNA5SP437-201ENST00000517249 129 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms