Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VPS4BO75351 VTRNA1-1-201ENST00000363120 99 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 Y_RNA.286-201ENST00000364813 102 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 Y_RNA.478-201ENST00000384358 107 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 Y_RNA.489-201ENST00000384410 101 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 MIR586-201ENST00000385035 97 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 MIR504-201ENST00000385065 83 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 RNU6-220P-201ENST00000390919 107 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 SNORD58.1-201ENST00000391313 66 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 Y_RNA.602-201ENST00000410535 92 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 RNU6-1199P-201ENST00000411249 104 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 HMGN2P35-201ENST00000412164 270 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS4BO75351 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS4BO75351 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 MIR3674-201ENST00000636576 68 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 MTND5P6-201ENST00000422338 1798 ntBASIC2.68□□□□□ -1.98
VPS4BO75351 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
VPS4BO75351 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
VPS4BO75351 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS4BO75351 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS4BO75351 Y_RNA.16-201ENST00000362421 102 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 Y_RNA.101-201ENST00000363154 102 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 U3.8-201ENST00000363675 217 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VPS4BO75351 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VPS4BO75351 RNU4-30P-201ENST00000410245 143 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 AC003685.2-201ENST00000422795 395 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS4BO75351 AL161788.1-201ENST00000441805 169 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 SNORD109B-201ENST00000458961 67 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 SNORD109A-201ENST00000459128 67 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 HMGB3P17-201ENST00000504195 649 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 AC008413.1-201ENST00000511864 177 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 SNORA48.11-201ENST00000517015 89 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 DEFB108E-201ENST00000524692 240 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
VPS4BO75351 MIR3128-201ENST00000581957 66 ntBASIC2.67□□□□□ -1.98
VPS4BO75351 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
VPS4BO75351 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
VPS4BO75351 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
VPS4BO75351 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS4BO75351 Y_RNA.20-201ENST00000362479 113 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 SNORD87-201ENST00000364849 89 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 RNU6-1180P-201ENST00000364935 107 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 RNU6-234P-201ENST00000365229 104 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 RNU6-326P-201ENST00000365480 107 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 RNU6-847P-201ENST00000411115 108 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 RPL23AP36-201ENST00000413895 458 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 CYP2C59P-201ENST00000457790 269 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 Y_RNA.638-201ENST00000459374 113 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 AC107222.1-201ENST00000510899 637 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 SERF1AP1-201ENST00000514575 187 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 RNU6-966P-201ENST00000516479 104 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 RNU7-110P-201ENST00000516891 62 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 RN7SKP40-201ENST00000517211 242 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 AC109329.2-201ENST00000519658 482 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS4BO75351 MIR4524B-201ENST00000581569 115 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS4BO75351 AC004467.1-201ENST00000615678 330 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 AL590808.1-201ENST00000618696 141 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.66□□□□□ -1.98
VPS4BO75351 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS4BO75351 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.65□□□□□ -1.98
VPS4BO75351 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 Y_RNA.136-201ENST00000363444 102 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 RNU6-1318P-201ENST00000365389 103 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 Y_RNA.352-201ENST00000365439 102 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 Y_RNA.416-201ENST00000384014 113 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 Y_RNA.446-201ENST00000384178 104 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 RNU6-21P-201ENST00000384710 107 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 MIR300-201ENST00000401138 83 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 MIR548H3-201ENST00000408771 118 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 RNU2-54P-201ENST00000410299 190 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 RNU2-48P-201ENST00000410694 191 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.65□□□□□ -1.99
VPS4BO75351 AC092427.1-202ENST00000430569 476 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 TOMM22P2-201ENST00000430735 237 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 AC005042.3-201ENST00000453230 174 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS4BO75351 RNU5F-4P-201ENST00000516581 114 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 RNU2-12P-201ENST00000517216 168 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 AL109918.3-201ENST00000603072 338 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS4BO75351 AC091932.3-201ENST00000624223 323 ntBASIC2.65□□□□□ -1.99
VPS4BO75351 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
VPS4BO75351 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
VPS4BO75351 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VPS4BO75351 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS4BO75351 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS4BO75351 RNU6-454P-201ENST00000364292 107 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 RNA5SP240-201ENST00000365355 128 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 RNU2-52P-201ENST00000410680 190 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS4BO75351 AC009963.1-201ENST00000417265 157 ntBASIC2.64□□□□□ -1.99
VPS4BO75351 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS4BO75351 AL513328.1-201ENST00000446460 224 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms