Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.72□□□□□ -1.97
PROM1O43490 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.72□□□□□ -1.97
PROM1O43490 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.72□□□□□ -1.97
PROM1O43490 RNA5SP432-201ENST00000362480 116 ntBASIC2.72□□□□□ -1.97
PROM1O43490 Y_RNA.76-201ENST00000362931 109 ntBASIC2.72□□□□□ -1.97
PROM1O43490 Y_RNA.101-201ENST00000363154 102 ntBASIC2.72□□□□□ -1.97
PROM1O43490 RNU6-1310P-201ENST00000384153 107 ntBASIC2.72□□□□□ -1.97
PROM1O43490 Y_RNA.785-201ENST00000384290 109 ntBASIC2.72□□□□□ -1.97
PROM1O43490 RNU4-70P-201ENST00000384579 139 ntBASIC2.72□□□□□ -1.97
PROM1O43490 Y_RNA.590-201ENST00000410140 107 ntBASIC2.72□□□□□ -1.97
PROM1O43490 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.72□□□□□ -1.97
PROM1O43490 AL451074.5-201ENST00000415894 435 ntBASIC2.72□□□□□ -1.97
PROM1O43490 MTCO1P5-201ENST00000433573 344 ntBASIC2.72□□□□□ -1.97
PROM1O43490 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.72□□□□□ -1.97
PROM1O43490 AL138752.1-201ENST00000452964 351 ntBASIC2.72□□□□□ -1.97
PROM1O43490 Y_RNA.700-201ENST00000516806 100 ntBASIC2.72□□□□□ -1.97
PROM1O43490 GTF3AP2-201ENST00000557014 266 ntBASIC2.72□□□□□ -1.97
PROM1O43490 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.72□□□□□ -1.97
PROM1O43490 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.72□□□□□ -1.97
PROM1O43490 AL512605.2-201ENST00000592972 256 ntBASIC2.72□□□□□ -1.97
PROM1O43490 RPL30P11-203ENST00000598995 310 ntBASIC2.72□□□□□ -1.97
PROM1O43490 AL590240.4-201ENST00000616908 390 ntBASIC2.72□□□□□ -1.97
PROM1O43490 MIR7157-201ENST00000635801 60 ntBASIC2.72□□□□□ -1.97
PROM1O43490 MIR3674-201ENST00000636576 68 ntBASIC2.72□□□□□ -1.97
PROM1O43490 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.72□□□□□ -1.97
PROM1O43490 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
PROM1O43490 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.71□□□□□ -1.97
PROM1O43490 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PROM1O43490 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
PROM1O43490 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
PROM1O43490 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PROM1O43490 SNORD87-201ENST00000364849 89 ntBASIC2.71□□□□□ -1.98
PROM1O43490 MIR512-1-201ENST00000384913 84 ntBASIC2.71□□□□□ -1.98
PROM1O43490 Y_RNA.793-201ENST00000411222 111 ntBASIC2.71□□□□□ -1.98
PROM1O43490 AC004866.1-201ENST00000411748 78 ntBASIC2.71□□□□□ -1.98
PROM1O43490 AL139156.1-201ENST00000412785 841 ntBASIC2.71□□□□□ -1.98
PROM1O43490 EEF1A1P41-201ENST00000414667 207 ntBASIC2.71□□□□□ -1.98
PROM1O43490 OOSP1P1-201ENST00000423265 274 ntBASIC2.71□□□□□ -1.98
PROM1O43490 EIF4EP4-201ENST00000424916 578 ntBASIC2.71□□□□□ -1.98
PROM1O43490 RPS29P6-201ENST00000438196 145 ntBASIC2.71□□□□□ -1.98
PROM1O43490 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
PROM1O43490 SUMO1P2-201ENST00000452524 304 ntBASIC2.71□□□□□ -1.98
PROM1O43490 AC140059.1-201ENST00000489238 361 ntBASIC2.71□□□□□ -1.98
PROM1O43490 RNA5SP112-201ENST00000515937 99 ntBASIC2.71□□□□□ -1.98
PROM1O43490 RNU6-966P-201ENST00000516479 104 ntBASIC2.71□□□□□ -1.98
PROM1O43490 RNU2-44P-201ENST00000516795 194 ntBASIC2.71□□□□□ -1.98
PROM1O43490 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.71□□□□□ -1.98
PROM1O43490 DEFB131C-201ENST00000528817 165 ntBASIC2.71□□□□□ -1.98
PROM1O43490 AC024405.2-202ENST00000532731 184 ntBASIC2.71□□□□□ -1.98
PROM1O43490 MIR3145-201ENST00000580727 82 ntBASIC2.71□□□□□ -1.98
PROM1O43490 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.71□□□□□ -1.98
PROM1O43490 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.71□□□□□ -1.98
PROM1O43490 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PROM1O43490 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.7□□□□□ -1.98
PROM1O43490 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PROM1O43490 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.7□□□□□ -1.98
PROM1O43490 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.7□□□□□ -1.98
PROM1O43490 Y_RNA.275-201ENST00000364726 110 ntBASIC2.7□□□□□ -1.98
PROM1O43490 AL139095.1-201ENST00000404326 391 ntBASIC2.7□□□□□ -1.98
PROM1O43490 RNU2-61P-201ENST00000411069 191 ntBASIC2.7□□□□□ -1.98
PROM1O43490 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.7□□□□□ -1.98
PROM1O43490 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.7□□□□□ -1.98
PROM1O43490 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.7□□□□□ -1.98
PROM1O43490 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
PROM1O43490 AC006380.1-201ENST00000603598 186 ntBASIC2.7□□□□□ -1.98
PROM1O43490 AC004792.1-201ENST00000614523 137 ntBASIC2.7□□□□□ -1.98
PROM1O43490 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
PROM1O43490 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
PROM1O43490 RNU4-80P-201ENST00000363200 141 ntBASIC2.69□□□□□ -1.98
PROM1O43490 RNU6-324P-201ENST00000363957 106 ntBASIC2.69□□□□□ -1.98
PROM1O43490 Y_RNA.270-201ENST00000364693 104 ntBASIC2.69□□□□□ -1.98
PROM1O43490 RNU6-662P-201ENST00000384253 104 ntBASIC2.69□□□□□ -1.98
PROM1O43490 RNU6-1289P-201ENST00000384431 106 ntBASIC2.69□□□□□ -1.98
PROM1O43490 RNU6-651P-201ENST00000411040 105 ntBASIC2.69□□□□□ -1.98
PROM1O43490 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.69□□□□□ -1.98
PROM1O43490 AL139132.1-201ENST00000431587 344 ntBASIC2.69□□□□□ -1.98
PROM1O43490 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.69□□□□□ -1.98
PROM1O43490 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.69□□□□□ -1.98
PROM1O43490 AC009237.7-201ENST00000447357 229 ntBASIC2.69□□□□□ -1.98
PROM1O43490 EEF1B2P7-201ENST00000451177 676 ntBASIC2.69□□□□□ -1.98
PROM1O43490 Y_RNA.644-201ENST00000459006 113 ntBASIC2.69□□□□□ -1.98
PROM1O43490 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.69□□□□□ -1.98
PROM1O43490 SNORD116-28-201ENST00000516123 91 ntBASIC2.69□□□□□ -1.98
PROM1O43490 Y_RNA.674-201ENST00000516362 113 ntBASIC2.69□□□□□ -1.98
PROM1O43490 RNU6-344P-201ENST00000516635 111 ntBASIC2.69□□□□□ -1.98
PROM1O43490 SNORA27.4-201ENST00000516650 95 ntBASIC2.69□□□□□ -1.98
PROM1O43490 AP002001.1-203ENST00000534002 267 ntBASIC2.69□□□□□ -1.98
PROM1O43490 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.69□□□□□ -1.98
PROM1O43490 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.69□□□□□ -1.98
PROM1O43490 ELOCP29-201ENST00000588193 334 ntBASIC2.69□□□□□ -1.98
PROM1O43490 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.69□□□□□ -1.98
PROM1O43490 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.69□□□□□ -1.98
PROM1O43490 AC080128.1-201ENST00000474389 1917 ntBASIC2.69□□□□□ -1.98
PROM1O43490 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.68□□□□□ -1.98
PROM1O43490 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PROM1O43490 MIR411-201ENST00000362239 96 ntBASIC2.68□□□□□ -1.98
PROM1O43490 Y_RNA.136-201ENST00000363444 102 ntBASIC2.68□□□□□ -1.98
PROM1O43490 Y_RNA.150-201ENST00000363562 102 ntBASIC2.68□□□□□ -1.98
PROM1O43490 Y_RNA.292-201ENST00000364904 97 ntBASIC2.68□□□□□ -1.98
PROM1O43490 RNU6-1264P-201ENST00000383891 107 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms