Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SLC28A1O00337 RNU6-1266P-201ENST00000362794 105 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 MIR10B-201ENST00000385011 110 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SLC28A1O00337 RNA5SP467-201ENST00000391274 118 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 MTND1P4-201ENST00000435196 415 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 snoU13.26-201ENST00000459452 105 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 AC093303.1-201ENST00000514549 295 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 RNU6-1016P-201ENST00000516689 94 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.46□□□□□ -2.18
SLC28A1O00337 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.46□□□□□ -2.18
SLC28A1O00337 MIR5695-201ENST00000579717 85 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 AC018462.2-201ENST00000605375 395 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 AL355802.3-201ENST00000607571 545 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 AC100812.1-201ENST00000607622 580 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.46□□□□□ -2.18
SLC28A1O00337 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
SLC28A1O00337 Y_RNA.48-201ENST00000362710 103 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 RNU6-271P-201ENST00000363858 105 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 RNU6-593P-201ENST00000364716 112 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 RNU1-78P-201ENST00000391248 165 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 MIR1185-2-201ENST00000408687 86 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 MTND3P8-201ENST00000412909 339 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 USP9YP16-201ENST00000430287 407 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 MTND3P23-201ENST00000431980 347 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.45□□□□□ -2.18
SLC28A1O00337 USP9YP23-201ENST00000455085 407 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.45□□□□□ -2.18
SLC28A1O00337 HMGN1P12-201ENST00000499125 195 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 AC103851.1-201ENST00000506833 274 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 CBX3P8-201ENST00000532412 525 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.45□□□□□ -2.18
SLC28A1O00337 MIR4709-201ENST00000577272 72 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 AC060780.3-201ENST00000589464 80 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 AC010999.1-201ENST00000611856 324 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 AL133216.2-202ENST00000634512 349 ntBASIC1.45□□□□□ -2.18
SLC28A1O00337 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.45□□□□□ -2.18
SLC28A1O00337 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SLC28A1O00337 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SLC28A1O00337 RNU1-42P-201ENST00000364033 160 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 SNORA4.2-201ENST00000365313 147 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.44□□□□□ -2.18
SLC28A1O00337 RNU6-331P-201ENST00000384724 107 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 MIR548F5-201ENST00000408421 86 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.44□□□□□ -2.18
SLC28A1O00337 AC007677.1-201ENST00000445757 515 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 RNU7-34P-201ENST00000459394 64 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 RN7SL429P-201ENST00000479090 223 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 RN7SL489P-201ENST00000486185 223 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 RN7SL327P-201ENST00000488659 223 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 AC069439.1-201ENST00000494739 167 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.44□□□□□ -2.18
SLC28A1O00337 RNU6-1114P-201ENST00000516022 107 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 RNU6-970P-201ENST00000516312 107 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 RNU1-142P-201ENST00000516682 145 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 AK6P2-201ENST00000549020 471 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 AL359075.3-201ENST00000613288 217 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 RN7SL853P-201ENST00000617250 223 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.44□□□□□ -2.18
SLC28A1O00337 AC095038.3-201ENST00000634439 195 ntBASIC1.44□□□□□ -2.18
SLC28A1O00337 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
SLC28A1O00337 RNU6-222P-201ENST00000362438 107 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SLC28A1O00337 RNU6-192P-201ENST00000391253 100 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 RNU1-139P-201ENST00000391307 165 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 MIR548K-201ENST00000408406 116 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 AC074085.1-201ENST00000413598 418 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 RPS3AP52-201ENST00000435639 297 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 AC245517.4-201ENST00000448601 281 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 AC107399.1-201ENST00000451226 265 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 RNU1-98P-201ENST00000458992 160 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 RPS26P55-201ENST00000471178 356 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 AL163195.1-201ENST00000496941 348 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 AC026782.1-201ENST00000512952 449 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 RNA5SP445-201ENST00000515889 115 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 RNU6-358P-201ENST00000516564 75 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.43□□□□□ -2.18
SLC28A1O00337 SNORD53B-201ENST00000577887 78 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 AC011712.1-201ENST00000588959 234 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.43□□□□□ -2.18
SLC28A1O00337 AC022432.1-201ENST00000595739 310 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 MZT1P2-201ENST00000604387 248 ntBASIC1.43□□□□□ -2.18
SLC28A1O00337 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.43□□□□□ -2.18
SLC28A1O00337 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SLC28A1O00337 MIR302D-201ENST00000362275 68 ntBASIC1.42□□□□□ -2.18
SLC28A1O00337 Y_RNA.2-201ENST00000362330 96 ntBASIC1.42□□□□□ -2.18
SLC28A1O00337 Y_RNA.72-201ENST00000362894 103 ntBASIC1.42□□□□□ -2.18
SLC28A1O00337 Y_RNA.184-201ENST00000363884 108 ntBASIC1.42□□□□□ -2.18
SLC28A1O00337 SNORD1A-201ENST00000364968 72 ntBASIC1.42□□□□□ -2.18
SLC28A1O00337 RNU6-203P-201ENST00000384038 104 ntBASIC1.42□□□□□ -2.18
SLC28A1O00337 Y_RNA.594-201ENST00000410373 140 ntBASIC1.42□□□□□ -2.18
SLC28A1O00337 AL161935.2-201ENST00000414627 60 ntBASIC1.42□□□□□ -2.18
SLC28A1O00337 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.42□□□□□ -2.18
SLC28A1O00337 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.42□□□□□ -2.18
SLC28A1O00337 AC018710.1-201ENST00000506509 158 ntBASIC1.42□□□□□ -2.18
SLC28A1O00337 Y_RNA.683-201ENST00000516508 93 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms