Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RNU6-454P-201ENST00000364292 107 ntBASIC2.96□□□□□ -1.94
CBX4O00257 RNU6-851P-201ENST00000384565 107 ntBASIC2.96□□□□□ -1.94
CBX4O00257 RPL21P3-201ENST00000395517 478 ntBASIC2.96□□□□□ -1.94
CBX4O00257 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.96□□□□□ -1.94
CBX4O00257 RN7SKP284-201ENST00000411002 343 ntBASIC2.96□□□□□ -1.94
CBX4O00257 AC024067.1-201ENST00000426199 223 ntBASIC2.96□□□□□ -1.94
CBX4O00257 HMGN2P18-201ENST00000450680 270 ntBASIC2.96□□□□□ -1.94
CBX4O00257 AC016925.1-201ENST00000458303 298 ntBASIC2.96□□□□□ -1.94
CBX4O00257 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.96□□□□□ -1.94
CBX4O00257 MIR3684-201ENST00000579779 74 ntBASIC2.96□□□□□ -1.94
CBX4O00257 AC090616.3-201ENST00000582184 217 ntBASIC2.96□□□□□ -1.94
CBX4O00257 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.96□□□□□ -1.94
CBX4O00257 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.96□□□□□ -1.94
CBX4O00257 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CBX4O00257 AL355596.1-201ENST00000565399 3996 ntBASIC2.95□□□□□ -1.94
CBX4O00257 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CBX4O00257 MIR1185-2-201ENST00000408687 86 ntBASIC2.95□□□□□ -1.94
CBX4O00257 RN7SKP123-201ENST00000410732 291 ntBASIC2.95□□□□□ -1.94
CBX4O00257 RNU6-1199P-201ENST00000411249 104 ntBASIC2.95□□□□□ -1.94
CBX4O00257 AC244505.4-201ENST00000434905 287 ntBASIC2.95□□□□□ -1.94
CBX4O00257 SSXP5-201ENST00000443473 287 ntBASIC2.95□□□□□ -1.94
CBX4O00257 RN7SL75P-201ENST00000461926 281 ntBASIC2.95□□□□□ -1.94
CBX4O00257 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.95□□□□□ -1.94
CBX4O00257 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.95□□□□□ -1.94
CBX4O00257 RNA5SP367-201ENST00000516557 118 ntBASIC2.95□□□□□ -1.94
CBX4O00257 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.95□□□□□ -1.94
CBX4O00257 AL512605.2-201ENST00000592972 256 ntBASIC2.95□□□□□ -1.94
CBX4O00257 AC141273.2-201ENST00000618989 130 ntBASIC2.95□□□□□ -1.94
CBX4O00257 AC078938.1-201ENST00000620993 318 ntBASIC2.95□□□□□ -1.94
CBX4O00257 snoZ196.1-201ENST00000625269 89 ntBASIC2.95□□□□□ -1.94
CBX4O00257 AL035425.3-201ENST00000564206 4996 ntBASIC2.95□□□□□ -1.94
CBX4O00257 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
CBX4O00257 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CBX4O00257 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.94□□□□□ -1.94
CBX4O00257 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CBX4O00257 Y_RNA.277-201ENST00000364754 102 ntBASIC2.94□□□□□ -1.94
CBX4O00257 Y_RNA.418-201ENST00000384029 102 ntBASIC2.94□□□□□ -1.94
CBX4O00257 RNU6-975P-201ENST00000384296 105 ntBASIC2.94□□□□□ -1.94
CBX4O00257 RNU6-1248P-201ENST00000391096 64 ntBASIC2.94□□□□□ -1.94
CBX4O00257 U3.40-201ENST00000408706 208 ntBASIC2.94□□□□□ -1.94
CBX4O00257 AC105272.1-201ENST00000438604 198 ntBASIC2.94□□□□□ -1.94
CBX4O00257 SUMO1P2-201ENST00000452524 304 ntBASIC2.94□□□□□ -1.94
CBX4O00257 AL137159.1-201ENST00000452808 512 ntBASIC2.94□□□□□ -1.94
CBX4O00257 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.94□□□□□ -1.94
CBX4O00257 RNU6-948P-201ENST00000516374 107 ntBASIC2.94□□□□□ -1.94
CBX4O00257 RNU6-966P-201ENST00000516479 104 ntBASIC2.94□□□□□ -1.94
CBX4O00257 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.94□□□□□ -1.94
CBX4O00257 MIR3162-201ENST00000581818 82 ntBASIC2.94□□□□□ -1.94
CBX4O00257 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.94□□□□□ -1.94
CBX4O00257 AC010900.2-201ENST00000604508 210 ntBASIC2.94□□□□□ -1.94
CBX4O00257 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.94□□□□□ -1.94
CBX4O00257 AC093831.2-201ENST00000624393 3427 ntBASIC2.93□□□□□ -1.94
CBX4O00257 MTCO1P5-201ENST00000433573 344 ntBASIC2.93□□□□□ -1.94
CBX4O00257 UBBP3-201ENST00000445497 241 ntBASIC2.93□□□□□ -1.94
CBX4O00257 AC091959.1-201ENST00000495857 238 ntBASIC2.93□□□□□ -1.94
CBX4O00257 RNU2-34P-201ENST00000516534 121 ntBASIC2.93□□□□□ -1.94
CBX4O00257 RN7SKP282-201ENST00000516824 299 ntBASIC2.93□□□□□ -1.94
CBX4O00257 RN7SKP40-201ENST00000517211 242 ntBASIC2.93□□□□□ -1.94
CBX4O00257 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.93□□□□□ -1.94
CBX4O00257 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CBX4O00257 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.92□□□□□ -1.94
CBX4O00257 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CBX4O00257 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.92□□□□□ -1.94
CBX4O00257 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CBX4O00257 AL139095.1-201ENST00000404326 391 ntBASIC2.92□□□□□ -1.94
CBX4O00257 RNU6-57P-201ENST00000411348 103 ntBASIC2.92□□□□□ -1.94
CBX4O00257 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.92□□□□□ -1.94
CBX4O00257 AC104389.3-201ENST00000445629 235 ntBASIC2.92□□□□□ -1.94
CBX4O00257 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.92□□□□□ -1.94
CBX4O00257 RNU6-111P-201ENST00000517179 105 ntBASIC2.92□□□□□ -1.94
CBX4O00257 RNU6-667P-201ENST00000517186 102 ntBASIC2.92□□□□□ -1.94
CBX4O00257 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.92□□□□□ -1.94
CBX4O00257 ELOCP29-201ENST00000588193 334 ntBASIC2.92□□□□□ -1.94
CBX4O00257 AC004832.5-201ENST00000608677 401 ntBASIC2.92□□□□□ -1.94
CBX4O00257 U4atac.1-201ENST00000618345 95 ntBASIC2.92□□□□□ -1.94
CBX4O00257 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.92□□□□□ -1.94
CBX4O00257 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CBX4O00257 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.92□□□□□ -1.94
CBX4O00257 AC009487.4-201ENST00000624969 3585 ntBASIC2.92□□□□□ -1.94
CBX4O00257 AC096644.4-201ENST00000563417 2912 ntBASIC2.92□□□□□ -1.94
CBX4O00257 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CBX4O00257 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CBX4O00257 Y_RNA.65-201ENST00000362846 100 ntBASIC2.91□□□□□ -1.94
CBX4O00257 SNORD115-30-201ENST00000364117 82 ntBASIC2.91□□□□□ -1.94
CBX4O00257 Y_RNA.243-201ENST00000364481 109 ntBASIC2.91□□□□□ -1.94
CBX4O00257 Y_RNA.329-201ENST00000365209 107 ntBASIC2.91□□□□□ -1.94
CBX4O00257 RNU6-1235P-201ENST00000384559 107 ntBASIC2.91□□□□□ -1.94
CBX4O00257 RN7SKP58-201ENST00000411010 305 ntBASIC2.91□□□□□ -1.94
CBX4O00257 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.91□□□□□ -1.94
CBX4O00257 AC009238.1-201ENST00000442165 424 ntBASIC2.91□□□□□ -1.94
CBX4O00257 AC009237.6-201ENST00000446969 424 ntBASIC2.91□□□□□ -1.94
CBX4O00257 AL139109.1-201ENST00000455491 297 ntBASIC2.91□□□□□ -1.94
CBX4O00257 RNU6-498P-201ENST00000459468 107 ntBASIC2.91□□□□□ -1.94
CBX4O00257 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.91□□□□□ -1.94
CBX4O00257 RNU6-991P-201ENST00000516168 107 ntBASIC2.91□□□□□ -1.94
CBX4O00257 RNU6-436P-201ENST00000516171 114 ntBASIC2.91□□□□□ -1.94
CBX4O00257 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.91□□□□□ -1.94
CBX4O00257 DEFB117-201ENST00000602356 141 ntBASIC2.91□□□□□ -1.94
CBX4O00257 U6.115-201ENST00000636045 103 ntBASIC2.91□□□□□ -1.94
CBX4O00257 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms