Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC087588.2-201ENST00000617667 426 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.5-201ENST00000362334 102 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-1164P-201ENST00000364428 107 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-593P-201ENST00000364716 112 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.358-201ENST00000365491 99 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.415-201ENST00000384012 112 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 MIR29B2-201ENST00000385055 81 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 SNORA40.19-201ENST00000390846 128 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 AL035666.1-201ENST00000446195 348 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 HMGN2P18-201ENST00000450680 270 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 ELOCP24-201ENST00000456370 334 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 AC091179.3-201ENST00000474761 144 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 SNORA25.15-201ENST00000516487 89 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 RNU1-117P-201ENST00000517041 158 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-58P-201ENST00000517143 103 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 AC018630.3-201ENST00000542637 96 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 MIR3683-201ENST00000580847 82 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 MZT1P2-201ENST00000604387 248 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 AC022140.2-201ENST00000623500 188 ntBASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
TRIM49D1C9J1S8 RNU4-9P-201ENST00000364951 139 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-26P-201ENST00000383985 107 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.463-201ENST00000384271 102 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-318P-201ENST00000384283 103 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.535-201ENST00000384612 99 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.557-201ENST00000384680 107 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 MIR1283-2-201ENST00000408621 87 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 RNU7-152P-201ENST00000458982 64 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 RNU7-14P-201ENST00000459331 62 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AC010531.2-201ENST00000465012 153 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AC027575.1-201ENST00000481064 460 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AC114801.2-201ENST00000503825 781 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-470P-201ENST00000515954 104 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 RNA5SP490-201ENST00000517141 136 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AP002001.1-203ENST00000534002 267 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AC004584.2-201ENST00000570407 410 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AL356157.2-201ENST00000605122 111 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AC007485.1-201ENST00000616755 206 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AL359314.1-201ENST00000616913 261 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AC005562.2-201ENST00000618264 111 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AC008121.3-201ENST00000618726 433 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AC137590.2-201ENST00000619709 240 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 AC138305.3-201ENST00000624988 240 ntBASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRIM49D1C9J1S8 RNU1-76P-201ENST00000362903 159 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 SNORA33-201ENST00000363664 130 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 RNU4-42P-201ENST00000364738 142 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 RNU6-1040P-201ENST00000383974 107 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 RNU6-418P-201ENST00000384035 107 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 SNORA8-201ENST00000384574 139 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 AC022028.1-201ENST00000412054 408 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 AC007098.1-201ENST00000420122 367 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 AC139712.2-201ENST00000424302 339 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 AP005660.1-201ENST00000522972 293 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 NDUFA5P6-201ENST00000542110 379 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 RRN3P3-201ENST00000549207 578 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 HSBP1P1-201ENST00000555205 166 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 MIR5006-201ENST00000583027 110 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 AC080078.3-201ENST00000605407 463 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 AC011476.5-201ENST00000615594 130 ntBASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRIM49D1C9J1S8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 RNA5SP190-201ENST00000365222 118 ntBASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 Y_RNA.384-201ENST00000383909 102 ntBASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 RNU6-474P-201ENST00000384243 107 ntBASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 SNORA67.2-201ENST00000384300 149 ntBASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 SNORD14D-201ENST00000384390 87 ntBASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 MIR518A2-201ENST00000384966 87 ntBASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 MIR517C-201ENST00000385103 95 ntBASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 MIR190B-201ENST00000401119 79 ntBASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 RPS26P42-201ENST00000413485 326 ntBASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 SNORD13-201ENST00000459299 104 ntBASIC1.45□□□□□ -2.18
TRIM49D1C9J1S8 HMGN2P9-201ENST00000476875 229 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 239.3 ms