Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR18B-201ENST00000454574 71 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 SNORD38.3-201ENST00000516599 73 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 RNU6-922P-201ENST00000516753 99 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 MTND4P33-201ENST00000556706 766 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.75□□□□□ -2.53
COL6A5A8TX70 Z99289.3-201ENST00000605586 594 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 MIR3976-201ENST00000606807 139 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 RNU6-87P-201ENST00000607561 108 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 RNU6-704P-201ENST00000364162 103 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 AC006366.1-201ENST00000422002 759 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.75□□□□□ -2.53
COL6A5A8TX70 RNU6-123P-201ENST00000516163 102 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.75□□□□□ -2.53
COL6A5A8TX70 POLR2KP1-201ENST00000553226 168 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 AC080188.3-201ENST00000624842 748 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 SCARNA4-201ENST00000629045 128 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 U6.99-201ENST00000637524 83 ntBASIC-0.75□□□□□ -2.53
COL6A5A8TX70 RNU6-28P-201ENST00000362378 107 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 RNU6-369P-201ENST00000362515 102 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 ART2BP-201ENST00000453501 499 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 MTCO3P8-201ENST00000453691 755 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 RPL39P39-201ENST00000455840 151 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 LINC01399-202ENST00000458450 244 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 RNU6-475P-201ENST00000516073 104 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.76□□□□□ -2.53
COL6A5A8TX70 AC120349.3-201ENST00000624377 529 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 SNORD113.3-201ENST00000364630 78 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 SNORD114-17-201ENST00000364699 75 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.76□□□□□ -2.53
COL6A5A8TX70 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.76□□□□□ -2.53
COL6A5A8TX70 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.76□□□□□ -2.53
COL6A5A8TX70 AC245047.8-201ENST00000456455 284 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 AC097473.1-201ENST00000508142 408 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.76□□□□□ -2.53
COL6A5A8TX70 Y_RNA.658-201ENST00000515990 97 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 SNORD22.1-201ENST00000516331 125 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 RN7SKP256-201ENST00000517201 314 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 AC018630.3-201ENST00000542637 96 ntBASIC-0.76□□□□□ -2.53
COL6A5A8TX70 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.76□□□□□ -2.53
COL6A5A8TX70 RNU6-502P-201ENST00000362419 108 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 SNORD113-7-201ENST00000363762 77 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 MIR147A-201ENST00000385079 72 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 RNA5SP323-201ENST00000391094 133 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AL121978.1-201ENST00000402778 359 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 RNA5SP261-201ENST00000410536 106 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 ELOCP9-201ENST00000418624 239 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 snoU13.30-201ENST00000458951 104 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AC013828.2-201ENST00000532487 235 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AC005771.1-201ENST00000585581 349 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.77□□□□□ -2.53
COL6A5A8TX70 RNU6-86P-201ENST00000606534 107 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 RNU6-652P-201ENST00000365488 107 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 RNU6-293P-201ENST00000411259 106 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AC008267.5-201ENST00000424928 265 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 FO393419.3-201ENST00000428741 282 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AL512637.2-201ENST00000431287 1256 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AP000533.3-201ENST00000447704 118 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.77□□□□□ -2.53
COL6A5A8TX70 RNU6-333P-201ENST00000459117 107 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 OR9P1P-201ENST00000496431 281 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.77□□□□□ -2.53
COL6A5A8TX70 DEFB131E-201ENST00000532329 154 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AC093012.1-202ENST00000549403 582 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 MIR5695-201ENST00000579717 85 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 DEFB131E-202ENST00000602581 683 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 AC006380.1-201ENST00000603598 186 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 MIR6507-201ENST00000613630 70 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.77□□□□□ -2.53
COL6A5A8TX70 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.78□□□□□ -2.53
COL6A5A8TX70 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.78□□□□□ -2.53
COL6A5A8TX70 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.78□□□□□ -2.53
COL6A5A8TX70 AC069271.1-201ENST00000445577 156 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.78□□□□□ -2.53
COL6A5A8TX70 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-0.78□□□□□ -2.53
COL6A5A8TX70 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.78□□□□□ -2.53
COL6A5A8TX70 MIR4709-201ENST00000577272 72 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 MIR4280-201ENST00000582178 76 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 MIR3925-201ENST00000584674 77 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 AC004223.2-201ENST00000590309 544 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 RNU6-702P-201ENST00000364982 107 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 AC022028.1-201ENST00000412054 408 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.78□□□□□ -2.53
COL6A5A8TX70 AC022483.1-201ENST00000514020 567 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 MTCO3P27-201ENST00000514397 196 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 RNU6-678P-201ENST00000516832 109 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 SNORD60.2-201ENST00000516883 86 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 RNU2-46P-201ENST00000517038 113 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
COL6A5A8TX70 BCRP9-201ENST00000605312 388 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms