Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 LINC02555-201ENST00000563933 1951 ntBASIC2.29□□□□□ -2.04
TCRBV7S3A2A0A539 Y_RNA.176-201ENST00000363815 109 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-20P-201ENST00000384106 107 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-1310P-201ENST00000384153 107 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-975P-201ENST00000384296 105 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 Y_RNA.574-201ENST00000384766 95 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 MIR483-201ENST00000385070 76 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 MIR548B-201ENST00000385247 97 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 SNORD115-46-201ENST00000390982 71 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 AC123900.1-201ENST00000420390 96 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 TOMM22P2-201ENST00000430735 237 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 AC005002.2-201ENST00000438228 269 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 AC114982.1-201ENST00000469402 321 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 RNU6-635P-201ENST00000516651 102 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 SNORA40.15-201ENST00000516884 107 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 AC087441.2-201ENST00000529141 262 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 AC008269.2-201ENST00000561915 1105 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 AC136932.1-201ENST00000574771 208 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 AC130454.1-201ENST00000622948 401 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 AL365361.1-201ENST00000566942 3481 ntBASIC2.28□□□□□ -2.04
TCRBV7S3A2A0A539 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.05
TCRBV7S3A2A0A539 AC080100.1-201ENST00000624239 5356 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.143-201ENST00000363520 106 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.149-201ENST00000363558 117 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-438P-201ENST00000365561 103 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 RNU1-148P-201ENST00000384472 162 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 RNU5A-5P-201ENST00000411054 116 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 HMGN2P35-201ENST00000412164 270 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 MTCYBP9-201ENST00000431021 303 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 MTCO1P44-201ENST00000441935 243 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 AC074290.1-201ENST00000448883 135 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 PRELID3BP1-201ENST00000457142 540 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 LINC01399-202ENST00000458450 244 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 RNU2-34P-201ENST00000516534 121 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 AP002001.1-203ENST00000534002 267 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 MIR5002-201ENST00000584713 97 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 MIR3674-201ENST00000636576 68 ntBASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.19-201ENST00000362462 99 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.47-201ENST00000362697 108 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.105-201ENST00000363182 111 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-743P-201ENST00000364151 106 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 RNU1-109P-201ENST00000383960 147 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.570-201ENST00000384750 101 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 MIR568-201ENST00000385036 95 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 MIR221-201ENST00000385135 110 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 MIR1185-2-201ENST00000408687 86 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-121P-201ENST00000410525 99 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 EDDM3CP-201ENST00000415977 425 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 AL390729.2-201ENST00000416137 156 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 AP001486.1-201ENST00000463339 476 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-991P-201ENST00000516168 107 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 RNU6-948P-201ENST00000516374 107 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 RNA5SP281-201ENST00000516504 135 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 MIR4300-201ENST00000581016 96 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 AC005176.2-201ENST00000596933 147 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 CTSLP2-204ENST00000629029 392 ntBASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TCRBV7S3A2A0A539 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 MIR340-201ENST00000362125 95 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 Y_RNA.99-201ENST00000363138 105 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 SNORA38-201ENST00000363946 132 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 SNORA67.4-201ENST00000384688 142 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 DYNLT3P2-201ENST00000442517 295 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 RNU7-57P-201ENST00000459540 60 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 RNY3P15-201ENST00000516297 97 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 MYL12BP1-201ENST00000569826 507 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 AC055872.1-201ENST00000570978 278 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 MIR4658-201ENST00000584344 65 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 AL109918.3-201ENST00000603072 338 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 AC009831.4-201ENST00000620744 325 ntBASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TCRBV7S3A2A0A539 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms