Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.59□□□□□ -2.5
TRAV13-2A0A0B4J235 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.59□□□□□ -2.5
TRAV13-2A0A0B4J235 AC072039.2-201ENST00000608883 439 ntBASIC-0.59□□□□□ -2.5
TRAV13-2A0A0B4J235 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 MIR892B-201ENST00000401279 77 ntBASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU7-159P-201ENST00000459284 62 ntBASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 snoU13.21-201ENST00000459368 105 ntBASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 IGLVI-20-201ENST00000519296 130 ntBASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 AC013828.2-201ENST00000532487 235 ntBASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 AC093027.1-201ENST00000546698 429 ntBASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 MIR4645-201ENST00000583158 77 ntBASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 BNIP3P26-201ENST00000600827 554 ntBASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.6□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU4-41P-201ENST00000364426 143 ntBASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 SNORA1.1-201ENST00000364671 133 ntBASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 SNORD100-201ENST00000408573 76 ntBASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 SNORA74.3-201ENST00000517108 154 ntBASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 AC123904.2-201ENST00000548059 300 ntBASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 MIR3124-201ENST00000582636 67 ntBASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 AC008521.1-201ENST00000587471 187 ntBASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 AL355073.2-201ENST00000612106 557 ntBASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 MIR2909-201ENST00000617113 69 ntBASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 AC098679.4-201ENST00000624241 654 ntBASIC-0.61□□□□□ -2.51
TRAV13-2A0A0B4J235 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 SNORD114-12-201ENST00000365400 75 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 SNORA67.2-201ENST00000384300 149 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 MIR454-201ENST00000390180 115 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 MIR891A-201ENST00000401237 79 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 AC005534.2-201ENST00000431047 433 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 MTCO3P8-201ENST00000453691 755 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 TRBVB-201ENST00000477100 408 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 AC107934.1-201ENST00000522215 217 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 MIR4804-201ENST00000581683 73 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 AC092447.9-201ENST00000603395 144 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 AC010999.1-201ENST00000611856 324 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 AC068792.1-201ENST00000621354 417 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 AL078596.1-201ENST00000624856 447 ntBASIC-0.62□□□□□ -2.51
TRAV13-2A0A0B4J235 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 SNORD114-31-201ENST00000363219 75 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 SNORD114-28-201ENST00000363610 72 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 MIR329-2-201ENST00000385029 84 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 MIR613-201ENST00000385248 95 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU6-269P-201ENST00000391077 97 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU4-46P-201ENST00000410818 138 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 AC005042.3-201ENST00000453230 174 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 snoU13.6-201ENST00000458785 104 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU7-165P-201ENST00000458864 60 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU2-56P-201ENST00000516826 190 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 MRPS36P4-201ENST00000534436 298 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 AC103996.1-201ENST00000555468 102 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 AC005730.3-201ENST00000583067 366 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 AP001836.1-201ENST00000604675 523 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 AC012467.1-201ENST00000607740 256 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 AC008873.1-201ENST00000625051 138 ntBASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.63□□□□□ -2.51
TRAV13-2A0A0B4J235 ZNF204P-201ENST00000416749 2397 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU6-609P-201ENST00000365459 107 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU6-925P-201ENST00000384629 104 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 RNA5SP482-201ENST00000391269 118 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 MTND3P20-201ENST00000407663 186 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 MIR1185-2-201ENST00000408687 86 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 AL117339.3-201ENST00000418733 162 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU6-88P-201ENST00000606801 100 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 MIR8064-201ENST00000612863 90 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 AC006927.2-201ENST00000639256 389 ntBASIC-0.64□□□□□ -2.51
TRAV13-2A0A0B4J235 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 SNORA36.1-201ENST00000363424 132 ntBASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 SNORA2A-201ENST00000383885 135 ntBASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 SNORA24.1-201ENST00000384401 135 ntBASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU4-49P-201ENST00000516080 140 ntBASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU7-129P-201ENST00000516128 62 ntBASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 AC104383.1-201ENST00000530297 370 ntBASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 AP000907.4-201ENST00000604143 237 ntBASIC-0.65□□□□□ -2.51
TRAV13-2A0A0B4J235 RNU6-137P-201ENST00000363680 108 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-560P-201ENST00000364007 108 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.66□□□□□ -2.52
TRAV13-2A0A0B4J235 RNU6-923P-201ENST00000364753 107 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms