Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 AL441883.1-201ENST00000566170 1045 ntBASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 AL023284.2-201ENST00000405850 579 ntBASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 HOMER2P1-201ENST00000455653 964 ntBASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 NEK4P2-201ENST00000580004 1012 ntBASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00588Q9Y4M8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
LINC00588Q9Y4M8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.96□□□□□ -0.34
LINC00588Q9Y4M8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00588Q9Y4M8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00588Q9Y4M8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC12.96□□□□□ -0.34
LINC00588Q9Y4M8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00588Q9Y4M8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00588Q9Y4M8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 MCCD1P1-208ENST00000445732 328 ntBASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 FEM1AP3-201ENST00000403722 1741 ntBASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 IRX1P1-201ENST00000438849 1838 ntBASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 AC141586.3-201ENST00000562166 1838 ntBASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC00588Q9Y4M8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00588Q9Y4M8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms