Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ABCA3Q99758 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
ABCA3Q99758 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.23■■□□□ 1.63
ABCA3Q99758 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
ABCA3Q99758 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
ABCA3Q99758 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ABCA3Q99758 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.23■■□□□ 1.63
ABCA3Q99758 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ABCA3Q99758 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
ABCA3Q99758 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC25.23■■□□□ 1.63
ABCA3Q99758 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ABCA3Q99758 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC25.23■■□□□ 1.63
ABCA3Q99758 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC25.23■■□□□ 1.63
ABCA3Q99758 MED22-202ENST00000371999 987 ntTSL 3 BASIC25.23■■□□□ 1.63
ABCA3Q99758 BX842568.4-201ENST00000421222 227 ntBASIC25.23■■□□□ 1.63
ABCA3Q99758 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC25.23■■□□□ 1.63
ABCA3Q99758 AC092183.1-201ENST00000469884 875 ntBASIC25.23■■□□□ 1.63
ABCA3Q99758 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ABCA3Q99758 CCNC-219ENST00000627680 896 ntTSL 5 BASIC25.23■■□□□ 1.63
ABCA3Q99758 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC25.22■■□□□ 1.63
ABCA3Q99758 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC25.22■■□□□ 1.63
ABCA3Q99758 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
ABCA3Q99758 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ABCA3Q99758 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
ABCA3Q99758 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ABCA3Q99758 AL031284.1-201ENST00000419297 478 ntBASIC25.22■■□□□ 1.63
ABCA3Q99758 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC25.22■■□□□ 1.63
ABCA3Q99758 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC25.22■■□□□ 1.63
ABCA3Q99758 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC25.22■■□□□ 1.63
ABCA3Q99758 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.22■■□□□ 1.63
ABCA3Q99758 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
ABCA3Q99758 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
ABCA3Q99758 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.22■■□□□ 1.63
ABCA3Q99758 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
ABCA3Q99758 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC25.21■■□□□ 1.63
ABCA3Q99758 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
ABCA3Q99758 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC25.21■■□□□ 1.63
ABCA3Q99758 AC005336.2-201ENST00000593183 939 ntBASIC25.21■■□□□ 1.63
ABCA3Q99758 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ABCA3Q99758 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
ABCA3Q99758 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ABCA3Q99758 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ABCA3Q99758 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
ABCA3Q99758 AC005332.3-201ENST00000589904 676 ntBASIC25.2■■□□□ 1.63
ABCA3Q99758 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC25.2■■□□□ 1.63
ABCA3Q99758 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC25.2■■□□□ 1.63
ABCA3Q99758 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
ABCA3Q99758 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
ABCA3Q99758 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ABCA3Q99758 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ABCA3Q99758 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC25.2■■□□□ 1.62
ABCA3Q99758 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ABCA3Q99758 AL162377.1-201ENST00000618844 1793 ntBASIC25.2■■□□□ 1.62
ABCA3Q99758 AC106730.1-201ENST00000566722 1090 ntBASIC25.2■■□□□ 1.62
ABCA3Q99758 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
ABCA3Q99758 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ABCA3Q99758 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ABCA3Q99758 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
ABCA3Q99758 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ABCA3Q99758 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ABCA3Q99758 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ABCA3Q99758 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
ABCA3Q99758 PGAM5P1-201ENST00000518923 814 ntBASIC25.19■■□□□ 1.62
ABCA3Q99758 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC25.19■■□□□ 1.62
ABCA3Q99758 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ABCA3Q99758 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ABCA3Q99758 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC25.19■■□□□ 1.62
ABCA3Q99758 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
ABCA3Q99758 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
ABCA3Q99758 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ABCA3Q99758 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC25.18■■□□□ 1.62
ABCA3Q99758 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ABCA3Q99758 KRT8P7-201ENST00000533003 1432 ntBASIC25.18■■□□□ 1.62
ABCA3Q99758 AL109659.2-201ENST00000606809 1674 ntBASIC25.18■■□□□ 1.62
ABCA3Q99758 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ABCA3Q99758 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.18■■□□□ 1.62
ABCA3Q99758 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ABCA3Q99758 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ABCA3Q99758 COX10-202ENST00000429152 875 ntTSL 2 BASIC25.18■■□□□ 1.62
ABCA3Q99758 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC25.18■■□□□ 1.62
ABCA3Q99758 RNPS1P1-201ENST00000507437 918 ntBASIC25.18■■□□□ 1.62
ABCA3Q99758 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC25.18■■□□□ 1.62
ABCA3Q99758 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC25.18■■□□□ 1.62
ABCA3Q99758 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC25.18■■□□□ 1.62
ABCA3Q99758 AC124864.1-201ENST00000623408 392 ntBASIC25.18■■□□□ 1.62
ABCA3Q99758 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC25.18■■□□□ 1.62
ABCA3Q99758 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ABCA3Q99758 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
ABCA3Q99758 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ABCA3Q99758 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ABCA3Q99758 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ABCA3Q99758 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC25.18■■□□□ 1.62
ABCA3Q99758 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ABCA3Q99758 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
ABCA3Q99758 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ABCA3Q99758 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ABCA3Q99758 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ABCA3Q99758 FAM197Y8-203ENST00000450145 560 ntBASIC25.17■■□□□ 1.62
ABCA3Q99758 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC25.17■■□□□ 1.62
ABCA3Q99758 PPOX-214ENST00000535223 664 ntTSL 3 BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms