Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.52■□□□□ 0.72
NOTCH4Q99466 AC104390.1-201ENST00000555663 520 ntBASIC19.52■□□□□ 0.72
NOTCH4Q99466 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.52■□□□□ 0.72
NOTCH4Q99466 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NOTCH4Q99466 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.52■□□□□ 0.72
NOTCH4Q99466 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NOTCH4Q99466 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.52■□□□□ 0.71
NOTCH4Q99466 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NOTCH4Q99466 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 TSPY22P-201ENST00000427496 604 ntBASIC19.51■□□□□ 0.71
NOTCH4Q99466 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 PCDHAC2-203ENST00000615316 3011 ntBASIC19.51■□□□□ 0.71
NOTCH4Q99466 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.51■□□□□ 0.71
NOTCH4Q99466 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.51■□□□□ 0.71
NOTCH4Q99466 AC112497.1-201ENST00000624824 639 ntBASIC19.51■□□□□ 0.71
NOTCH4Q99466 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NOTCH4Q99466 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.5■□□□□ 0.71
NOTCH4Q99466 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NOTCH4Q99466 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.5■□□□□ 0.71
NOTCH4Q99466 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.5■□□□□ 0.71
NOTCH4Q99466 TSSC2-201ENST00000450217 709 ntBASIC19.5■□□□□ 0.71
NOTCH4Q99466 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.5■□□□□ 0.71
NOTCH4Q99466 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NOTCH4Q99466 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 AC008556.1-201ENST00000610908 2040 ntBASIC19.5■□□□□ 0.71
NOTCH4Q99466 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NOTCH4Q99466 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NOTCH4Q99466 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NOTCH4Q99466 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NOTCH4Q99466 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 PVRIG2P-201ENST00000435460 978 ntBASIC19.49■□□□□ 0.71
NOTCH4Q99466 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 AC010240.3-201ENST00000607688 395 ntBASIC19.49■□□□□ 0.71
NOTCH4Q99466 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 LINC01521-201ENST00000504184 1943 ntBASIC19.49■□□□□ 0.71
NOTCH4Q99466 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NOTCH4Q99466 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NOTCH4Q99466 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NOTCH4Q99466 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NOTCH4Q99466 AL109659.2-201ENST00000606809 1674 ntBASIC19.49■□□□□ 0.71
NOTCH4Q99466 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 AC011498.5-201ENST00000592027 486 ntBASIC19.49■□□□□ 0.71
NOTCH4Q99466 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.49■□□□□ 0.71
NOTCH4Q99466 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NOTCH4Q99466 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NOTCH4Q99466 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.48■□□□□ 0.71
NOTCH4Q99466 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NOTCH4Q99466 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NOTCH4Q99466 CLDN5-201ENST00000403084 2357 ntBASIC19.48■□□□□ 0.71
NOTCH4Q99466 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NOTCH4Q99466 RCC2P3-201ENST00000418112 1537 ntBASIC19.48■□□□□ 0.71
NOTCH4Q99466 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NOTCH4Q99466 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NOTCH4Q99466 KRT18P23-201ENST00000435622 1283 ntBASIC19.48■□□□□ 0.71
NOTCH4Q99466 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.48■□□□□ 0.71
NOTCH4Q99466 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms