Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 MIR662-201ENST00000384847 95 ntBASIC20.1■□□□□ 0.81
ZNF558Q96NG5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 RN7SL510P-201ENST00000581311 263 ntBASIC20.1■□□□□ 0.81
ZNF558Q96NG5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF558Q96NG5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 KRT18P23-201ENST00000435622 1283 ntBASIC20.09■□□□□ 0.81
ZNF558Q96NG5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 AL109659.2-201ENST00000606809 1674 ntBASIC20.09■□□□□ 0.81
ZNF558Q96NG5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.09■□□□□ 0.81
ZNF558Q96NG5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 RCC2P3-201ENST00000418112 1537 ntBASIC20.08■□□□□ 0.81
ZNF558Q96NG5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 TSPY22P-201ENST00000427496 604 ntBASIC20.08■□□□□ 0.81
ZNF558Q96NG5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNF558Q96NG5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF558Q96NG5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
ZNF558Q96NG5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF558Q96NG5 KRT8P7-201ENST00000533003 1432 ntBASIC20.08■□□□□ 0.8
ZNF558Q96NG5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.08■□□□□ 0.8
ZNF558Q96NG5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 KRT18P1-202ENST00000452408 1331 ntBASIC20.07■□□□□ 0.8
ZNF558Q96NG5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.07■□□□□ 0.8
ZNF558Q96NG5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 AC004870.1-201ENST00000315132 882 ntBASIC20.07■□□□□ 0.8
ZNF558Q96NG5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ZNF558Q96NG5 AL512353.2-201ENST00000448759 1962 ntBASIC20.06■□□□□ 0.8
ZNF558Q96NG5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms