Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 AC009237.14-201ENST00000609975 1594 ntBASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 RPL13AP23-201ENST00000480739 586 ntBASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 POM121L3P-201ENST00000419331 1163 ntBASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 AC034105.1-201ENST00000563488 319 ntBASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ALMS1Q8TCU4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 MED15P5-201ENST00000423150 992 ntBASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 HNRNPDP1-201ENST00000439535 754 ntBASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 AC073648.2-201ENST00000510116 352 ntBASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 AC090616.6-201ENST00000582640 721 ntBASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 AC024563.2-201ENST00000603282 481 ntBASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms