Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 AL109659.2-201ENST00000606809 1674 ntBASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.87■□□□□ 0.45
ARHGEF39Q8N4T4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 AC104076.2-201ENST00000448912 469 ntBASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 AC141257.4-201ENST00000634557 245 ntBASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 AC136944.6-201ENST00000634818 245 ntBASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.86■□□□□ 0.45
ARHGEF39Q8N4T4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARHGEF39Q8N4T4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 RCC2P3-201ENST00000418112 1537 ntBASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 BX664615.1-201ENST00000443558 458 ntBASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 AL512604.3-201ENST00000569583 964 ntBASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ARHGEF39Q8N4T4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.83■□□□□ 0.45
ARHGEF39Q8N4T4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ARHGEF39Q8N4T4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
ARHGEF39Q8N4T4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ARHGEF39Q8N4T4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF39Q8N4T4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms