Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 TERC-201ENST00000602385 541 ntBASIC23.77■■□□□ 1.4
COL23A1Q86Y22 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL23A1Q86Y22 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
COL23A1Q86Y22 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 AC005104.2-201ENST00000427818 678 ntBASIC23.75■■□□□ 1.39
COL23A1Q86Y22 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 AL049840.3-201ENST00000602669 611 ntBASIC23.75■■□□□ 1.39
COL23A1Q86Y22 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL23A1Q86Y22 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 AC020907.5-201ENST00000624372 1936 ntBASIC23.74■■□□□ 1.39
COL23A1Q86Y22 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 IGHGP-201ENST00000390555 1178 ntBASIC23.74■■□□□ 1.39
COL23A1Q86Y22 AC073648.2-201ENST00000510116 352 ntBASIC23.74■■□□□ 1.39
COL23A1Q86Y22 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
COL23A1Q86Y22 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 RPL13AP23-201ENST00000480739 586 ntBASIC23.73■■□□□ 1.39
COL23A1Q86Y22 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.73■■□□□ 1.39
COL23A1Q86Y22 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.72■■□□□ 1.39
COL23A1Q86Y22 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.72■■□□□ 1.39
COL23A1Q86Y22 AF186996.4-201ENST00000467186 377 ntBASIC23.72■■□□□ 1.39
COL23A1Q86Y22 GUSBP12-201ENST00000513727 720 ntBASIC23.72■■□□□ 1.39
COL23A1Q86Y22 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC23.72■■□□□ 1.39
COL23A1Q86Y22 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.72■■□□□ 1.39
COL23A1Q86Y22 LINC02084-201ENST00000606069 1096 ntBASIC23.72■■□□□ 1.39
COL23A1Q86Y22 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.72■■□□□ 1.39
COL23A1Q86Y22 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL23A1Q86Y22 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL23A1Q86Y22 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
COL23A1Q86Y22 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms