Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT39Q6A163 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT39Q6A163 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
KRT39Q6A163 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
KRT39Q6A163 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT39Q6A163 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.45■□□□□ 0.86
KRT39Q6A163 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT39Q6A163 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT39Q6A163 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT39Q6A163 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT39Q6A163 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT39Q6A163 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT39Q6A163 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT39Q6A163 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
KRT39Q6A163 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT39Q6A163 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KRT39Q6A163 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT39Q6A163 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.45■□□□□ 0.86
KRT39Q6A163 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT39Q6A163 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KRT39Q6A163 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
KRT39Q6A163 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
KRT39Q6A163 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
KRT39Q6A163 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
KRT39Q6A163 CRYGFP-201ENST00000418459 633 ntBASIC20.44■□□□□ 0.86
KRT39Q6A163 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.44■□□□□ 0.86
KRT39Q6A163 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 AC093827.2-201ENST00000512654 315 ntBASIC20.44■□□□□ 0.86
KRT39Q6A163 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
KRT39Q6A163 AP005242.2-201ENST00000580065 1175 ntBASIC20.44■□□□□ 0.86
KRT39Q6A163 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.44■□□□□ 0.86
KRT39Q6A163 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.44■□□□□ 0.86
KRT39Q6A163 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.44■□□□□ 0.86
KRT39Q6A163 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.44■□□□□ 0.86
KRT39Q6A163 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT39Q6A163 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT39Q6A163 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT39Q6A163 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT39Q6A163 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.43■□□□□ 0.86
KRT39Q6A163 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT39Q6A163 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT39Q6A163 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT39Q6A163 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT39Q6A163 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT39Q6A163 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT39Q6A163 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.43■□□□□ 0.86
KRT39Q6A163 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.43■□□□□ 0.86
KRT39Q6A163 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.43■□□□□ 0.86
KRT39Q6A163 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT39Q6A163 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT39Q6A163 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT39Q6A163 AC066615.1-201ENST00000640911 628 ntBASIC20.43■□□□□ 0.86
KRT39Q6A163 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.43■□□□□ 0.86
KRT39Q6A163 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
KRT39Q6A163 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.43■□□□□ 0.86
KRT39Q6A163 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT39Q6A163 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT39Q6A163 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KRT39Q6A163 AC093525.10-201ENST00000625130 1569 ntBASIC20.42■□□□□ 0.86
KRT39Q6A163 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.42■□□□□ 0.86
KRT39Q6A163 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
KRT39Q6A163 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
KRT39Q6A163 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
KRT39Q6A163 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
KRT39Q6A163 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
KRT39Q6A163 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.42■□□□□ 0.86
KRT39Q6A163 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
KRT39Q6A163 AL355075.4-201ENST00000554988 638 ntBASIC20.42■□□□□ 0.86
KRT39Q6A163 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT39Q6A163 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms